Commits · ce6b1b316fd07720c8c4ee6e3fc7eaaeda047c4a · ensembl-gh-mirror / ensembl

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Nov 12, 2002
- runtests script now catches SIG, INT and HUP signals to ensure correct cleanup · ce6b1b31
  Graham McVicker authored 22 years ago
```
changed some throws to warnings in MultiTestDB
```
  ce6b1b31
- get_repeat_masked_seq uses every repeat type for masking when no logic name specified · 29389440
  Graham McVicker authored 22 years ago
```
slice get_repeat_masked_seq made consistent with rawcontig version
updated some slice pods
```
  29389440
- startphase was ignored · bf185377
  Arne Stabenau authored 22 years ago
  
  bf185377
- new script to run and parse scanwisepep · 87f5632f
  Emmanuel Mongin authored 22 years ago
  
  87f5632f
- changed exon -> end · 3894e423
  Web Admin authored 22 years ago
  
  3894e423
- hopefully fixed pt on intron not coming back · c569efbc
  Arne Stabenau authored 22 years ago
  
  c569efbc
Nov 11, 2002
- bug fix to last commit · 88b3aa51
  Arne Stabenau authored 22 years ago
  
  88b3aa51
- added fetch_by_transcript_stable_id · 8de931a7
  Arne Stabenau authored 22 years ago
  
  8de931a7
- some changes to the EMBL_Dumper scripts fixed - things that had dropped off the head · 38a8e09a
  Web Admin authored 22 years ago
  
  38a8e09a
- "fixed" exon->contig_id errors · 22691524
  Simon Potter authored 22 years ago
  
  22691524
- stupid filtering condition fixed · 961a52ac
  Arne Stabenau authored 22 years ago
  
  961a52ac
- added GO based call · 721afef0
  Web Admin authored 22 years ago
  
  721afef0
- removed shouts · 02f15da7
  Web Admin authored 22 years ago
  
  02f15da7
- EMBL_dumping prints snps now · 9aae8baa
  Graham McVicker authored 22 years ago
  
  9aae8baa
- SNP db nameing inconsistent · 0fe0fb74
  Arne Stabenau authored 22 years ago
  
  0fe0fb74
- bug fix · ef41c7f6
  Arne Stabenau authored 22 years ago
  
  ef41c7f6
- more embl dumping updates · a64c020c
  Graham McVicker authored 22 years ago
  
  a64c020c
- added get_all_translateable_Exons method to PredictionTranscript for consistancy w/ Transcript · bb97c527
  Graham McVicker authored 22 years ago
  
  bb97c527
- Test script for MultiTestDB.pm. · bc22a08b
  Alistair Rust authored 22 years ago
  
  bc22a08b
- Implemented the save method. · f352fdb3
  Alistair Rust authored 22 years ago
  
  f352fdb3
- wrap prediction transcripts for embl dumping · 6c3ad6c3
  Graham McVicker authored 22 years ago
  
  6c3ad6c3
- added EMBL dumping TranscriptWrapper · a6636831
  Graham McVicker authored 22 years ago
  
  a6636831
- source primary tag set on organism · 45415d8e
  Arne Stabenau authored 22 years ago
  
  45415d8e
- fixed · 9b104f56
  Web Admin authored 22 years ago
  
  9b104f56
Nov 10, 2002
- Even if no chromosome exists in the database an empty one is returned. · 01bb2f1c
  Michele Clamp authored 22 years ago
```
Now returns null
```
  01bb2f1c
Nov 08, 2002
- added back fetch_by_mapfrag so mouse works · 4f3123af
  Web Admin authored 22 years ago
  
  4f3123af
- added additional call to get gene by external-db name · 8bcc5fed
  Web Admin authored 22 years ago
  
  8bcc5fed
- typo · 3e0fbde2
  Arne Stabenau authored 22 years ago
  
  3e0fbde2
- added stable id to prediction transcripts · 254f7ab2
  Graham McVicker authored 22 years ago
  
  254f7ab2
- Maybe now I've got rid of ALL the sticky-exon supporting features. · af70810b
  Alistair Rust authored 22 years ago
  
  af70810b
- Hmmmm. Delete the right things from the right table. · 78481133
  Alistair Rust authored 22 years ago
  
  78481133
- snp source tag now used · e149fc32
  Graham McVicker authored 22 years ago
  
  e149fc32
- Removed sticky-exon related protein_align_feature nasties. · 4f7f5a1f
  Alistair Rust authored 22 years ago
  
  4f7f5a1f
- Updated the store function to work the new scchema + removed cruft · 7033ff40
  Emmanuel Mongin authored 22 years ago
  
  7033ff40
- "Better" chunk of chr20 selected. · ff352c66
  Alistair Rust authored 22 years ago
  
  ff352c66
- An alternative 1MB stretch of chr20. · a1cbc2d5
  Alistair Rust authored 22 years ago
  
  a1cbc2d5
- list-->listref list_geneIds · ec6ae655
  Arne Stabenau authored 22 years ago
  
  ec6ae655
Nov 07, 2002
- podding while test writing · a8bfbd14
  Arne Stabenau authored 22 years ago
  
  a8bfbd14
- pod typos · a4f69d7b
  Simon Potter authored 22 years ago
  
  a4f69d7b
- reordered a few feature table columns for consistency · ea877e28
  Simon Potter authored 22 years ago
  
  ea877e28