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- Jun 27, 2013
- Jun 13, 2013
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Kieron Taylor authored
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- Jun 12, 2013
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Kieron Taylor authored
Significant alterations, including two additional tables to allow for arbitrary allele types and annotations. Bare essentials only, but passing tests.
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- Jun 05, 2013
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Kieron Taylor authored
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- Mar 27, 2013
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Kieron Taylor authored
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- Feb 01, 2013
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Kieron Taylor authored
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Kieron Taylor authored
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- Jan 16, 2013
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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- Jan 15, 2013
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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- Jan 11, 2013
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Kieron Taylor authored
Altered store_alt_alleles method to make use of AltAlleleGroup objects instead of going straight to the database.
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- Jan 09, 2013
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Kieron Taylor authored
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- Dec 19, 2012
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Kieron Taylor authored
Very basic object and test put together. Adaptor not yet working.
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Kieron Taylor authored
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- Dec 11, 2012
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Magali Ruffier authored
given two databases of the same species, compares the xrefs used for gene display to describe the statistics of what has changed between databases
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Kieron Taylor authored
Applied wait constraints to all three calls. Could have refactored, but the system calls are fiddly and I'll probably make more mistakes that way.
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Kieron Taylor authored
Added a queue waiting command to prevent e.g. Human and Mouse projecting simultaneously when Mouse relies upon Human to be complete and correct.
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Andy Yates authored
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Andy Yates authored
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- Dec 10, 2012
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Kieron Taylor authored
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Kieron Taylor authored
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Laurent Gil authored
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- Dec 07, 2012
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Kieron Taylor authored
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Andy Yates authored
If PASS is not pulled out into a local variable then passed into DBI we will attempt to connect to a database (DBI->trace() confirms the passing of a password). Perl is very odd
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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- Dec 06, 2012
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Andy Yates authored
Counting features over HAPs/Patches/PARs was not working. Fixed by adding a SQL based filtering stage. The normal code will not use this as it is quite nasty
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Magali Ruffier authored
data should rely on protein evidence levels provided by Uniprot
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- Dec 05, 2012
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Steve Trevanion authored
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- Dec 04, 2012
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Andy Yates authored
[ENSCORESW-315]. Fixing a bug where the bind params need to be reused on subsequent queries. MySQL/DBI/DBD::mysql is really bad at warning us when we submit a query with a single ? and no bind parameters (it compensates). Wish it didn't
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