changed the way display_xref works in Gene and Transcript. Now takes DBEntry object as argument. Is lazy loaded on request, if its not set before.

fixed some memory leak problems, store Analysis object will now happen on feature store. That could slow down the Pipeline

briggsae parsing code

briggsae options

briggsae options

added briggsae options

from one database into another database

added BRIGGSAE_HYBRID to external_dbs

changed Bio::Annotation objects to Bio::Annotation::Collection objects to make BioPerl/EMBL_dumping happy

get_supporting evidence should at least return [], add_supporting evidence should only create array if there is something to add

transltion stable ids will now be stored if defined in the object

untested but still compiles