added peptide ---> contig coordinate mapping on Transcript. Not tested. Mainly to make sure I shift the code off my laptop

same fixes as in branch-4: get_Genes_by_Type treats nicely the supp_evidence and invert() preserves the db object in contig

Not much gain to see so far, all alignments look ungapped.
Probably still buggy.

not ready yet.

Adaptor to store in db and retrieve.

Added a specific option in the mapping_conf file for NCBI prediction. Flaged the different entries retrieved in get_Xmapping.pl; KNOWN for SPTR and curated Refseq, XREF for all of the entries retrieved from the KNOWN matches and then PRED for all of the sequences predicted by other teams (in that case NCBI for human but can be anything).

Feature are not storable.

added test_db. Will return a DBAdaptor. On first call uploads test-db subdir into named database. Then only connects to that db. Is not auto removed, so doesnt cost much time on multiple test runs.

in test-db subdirectory in t. Database handle for this db is static in EnsTestDB so
not regenerated for each subtest.

some tables missing, not yet best area of genome.

them into Fpc tables. Missing: Accessions for the clones.