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- Dec 16, 2014
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Kevin Howe authored
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- Oct 23, 2014
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Kevin Howe authored
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Kevin Howe authored
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Kevin Howe authored
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- Oct 22, 2014
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Alessandro Vullo authored
Updated to ensembl ontology 78.
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Alessandro Vullo authored
The label is no longer truncated at the first 35 chars, as there does seem to be no reason for that.
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- Oct 21, 2014
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Kieron Taylor authored
Make the method 'get_all_somatic_VariationFeatures' works the same way a...
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Kieron Taylor authored
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Laurent Gil authored
Make the method 'get_all_somatic_VariationFeatures' works the same way as 'get_all_VariationFeatures'
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- Oct 16, 2014
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Kieron Taylor authored
Updated caching
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Magali Ruffier authored
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Thomas Juettemann authored
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Magali Ruffier authored
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- Oct 14, 2014
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Kieron Taylor authored
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- Oct 13, 2014
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Alessandro Vullo authored
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- Oct 10, 2014
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Kieron Taylor authored
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Alessandro Vullo authored
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- Oct 09, 2014
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Kieron Taylor authored
Changed caching of unmapped reasons from new to store method to combat race conditions
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Alessandro Vullo authored
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- Oct 08, 2014
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Kieron Taylor authored
[ENSCORESW-1057] Patch for get_overlapping_Genes for same-feature searches. Additional tests for this method added.
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- Oct 07, 2014
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Kieron Taylor authored
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Kieron Taylor authored
[ENSCORESW-1047] Altering column sizes for source in gene and transcript tables. Also patch test databases.
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Kieron Taylor authored
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- Oct 06, 2014
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Kieron Taylor authored
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- Oct 02, 2014
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Thomas Juettemann authored
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- Sep 29, 2014
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Kieron Taylor authored
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- Sep 23, 2014
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Magali Ruffier authored
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- Sep 22, 2014
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Magali Ruffier authored
include alternative sequences with correct start/end
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Magali Ruffier authored
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Magali Ruffier authored
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- Sep 19, 2014
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Magali Ruffier authored
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Magali Ruffier authored
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- Sep 18, 2014
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Kieron Taylor authored
[ENSCORESW-1038] Fix bug in negative stranded assembly exceptions. Scoped variables were forgetting their new values and coming back undef.
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Kieron Taylor authored
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- Sep 10, 2014
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Magali Ruffier authored
ignoring phase creates more false positives than false negatives also improves the overall exon mapping
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- Sep 09, 2014
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Magali Ruffier authored
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Magali Ruffier authored
added transcript_biotype in attrib field
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- Sep 08, 2014
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Kieron Taylor authored
Convenience accessors in GeneAdaptor. Main code in BaseFeatureAdaptor. fetch_all_nearest_by_Feature provides an exhaustive mechanism for finding nearby features and ordering them by proximity.
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Kieron Taylor authored
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