Commits · f9db1c3f4fc84c81b2c29431be7c1b470275697c · ensembl-gh-mirror / ensembl

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Jul 18, 2012

Adding an iterator for subseqs to the Slice object. Means a lot of our code... · 00c2dd8c

Andy Yates authored 12 years ago

Adding an iterator for subseqs to the Slice object. Means a lot of our code which deals with iteration of slices can delegate to this for its logic.

00c2dd8c

Jun 08, 2012
- Better test case which reports what has gone wrong · a5230e0e
  Andy Yates authored 12 years ago
  
  a5230e0e
Apr 26, 2012
- Improved error checking · b766f062
  Andy Yates authored 12 years ago
  
  b766f062
Sep 22, 2011
- Adding a new method for describing a region's assembly exception type · a2ccb531
  Andy Yates authored 13 years ago
  
  a2ccb531
Nov 12, 2010
- tests for seq region synonym added · 8abf94cb
  Ian Longden authored 14 years ago
  
  8abf94cb
Mar 21, 2006
- added get_all_Transcripts() test · 5ec9b089
  Patrick Meidl authored 19 years ago
  
  5ec9b089
Apr 18, 2005
- type ensembl removed from test, is not allowed any more · 3b0b489b
  Arne Stabenau authored 19 years ago
  
  3b0b489b
Jul 23, 2004
- updated tests to use centralised ensembl-test framework · 9cc34eb7
  Graham McVicker authored 20 years ago
  
  9cc34eb7
May 24, 2004
- added some tests for creation of slices sans db and coord system · 956d986e
  Graham McVicker authored 20 years ago
  
  956d986e
Apr 27, 2004
- added test for new seq_region_Slice method · 7a8d5033
  Graham McVicker authored 20 years ago
  
  7a8d5033
Mar 01, 2004
- fixed test count · b096923c
  Graham McVicker authored 21 years ago
  
  b096923c
- adapt the test to new Attribute API · fc27c1a5
  Arne Stabenau authored 21 years ago
  
  fc27c1a5
Feb 26, 2004
- added project return value check · d09271e3
  Arne Stabenau authored 21 years ago
  
  d09271e3
Feb 23, 2004
- added tests for getting a subseq of a preloaded Slice sequence · f7dded2f
  Graham McVicker authored 21 years ago
  
  f7dded2f
Feb 11, 2004
- updated tests for new toplevel implementation · 21329512
  Graham McVicker authored 21 years ago
  
  21329512
Jan 13, 2004
- changes and new tests for new slice attribute seq_region_length · 118cc245
  Graham McVicker authored 21 years ago
  
  118cc245
Jan 09, 2004
- Merged in the new-seqstore into HEAD version · fc6ced68
  Arne Stabenau authored 21 years ago
  
  fc6ced68
Mar 03, 2003
- added test for Slice::get_base_count · 7716a16a
  Graham McVicker authored 22 years ago
  
  7716a16a
Nov 21, 2002
- nt_contigs as slices supported · 506a9249
  Arne Stabenau authored 22 years ago
  
  506a9249
Nov 15, 2002
- finished cleanup, tests work · 19d14ffa
  Arne Stabenau authored 22 years ago
  
  19d14ffa
Nov 13, 2002
- more tests · ac1300b8
  Graham McVicker authored 22 years ago
  
  ac1300b8
- added arg check to Slice::get_all_MapFrags · e783f0ab
  Graham McVicker authored 22 years ago
```
updated slice test script
```
  e783f0ab
- Updated Slice PODs · 4a33ebbe
  Graham McVicker authored 22 years ago
```
Updated slice.t test script
```
  4a33ebbe
Nov 12, 2002
- runtests script now catches SIG, INT and HUP signals to ensure correct cleanup · ce6b1b31
  Graham McVicker authored 22 years ago
```
changed some throws to warnings in MultiTestDB
```
  ce6b1b31
Apr 16, 2002
- commits for slices for laura - laura - clone.t is now failing. Unclear if this is me or you · cbfc45d3
  Ewan Birney authored 22 years ago
  
  cbfc45d3
Apr 11, 2002
- Added a test for ProteinAlignFeatureAdaptor and altered the dnaalignfeature... · c2848e44
  Laura Clarke authored 22 years ago
```
Added a test for ProteinAlignFeatureAdaptor and altered the dnaalignfeature test to work with the alterd base align
feature
```
  c2848e44
Apr 10, 2002
- added DNA align feature test - need to refactor adaptor · 20fc5116
  Ewan Birney authored 22 years ago
  
  20fc5116