Commits · fd99044257a108717d369450889b1b4c6b378b11 · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring failed 2 months ago.
Repository mirroring has been paused due to too many failed attempts. It can be resumed by a project maintainer or owner.
Last successful update 5 months ago.

Jun 15, 2004
- fixed test count · fd990442
  Graham McVicker authored 20 years ago
  
  fd990442
Jun 14, 2004
- use INSERT IGNORE and ensure that duplicate density_types are not stored · 251af007
  Graham McVicker authored 20 years ago
  
  251af007
- added test to check that duplicate density types are not stored · c16b169d
  Graham McVicker authored 20 years ago
  
  c16b169d
- changed density_type analysis_idx key to UNIQUE key · 62a10fed
  Graham McVicker authored 20 years ago
  
  62a10fed
- Updated for forthcoming release · d871c530
  Glenn Proctor authored 20 years ago
  
  d871c530
Jun 11, 2004
- wrapper for glovar_snp_density.pl to minimize memory footprint · 6f4f78ca
  Patrick Meidl authored 20 years ago
  
  6f4f78ca
- fixed duplicate counting bug, now can be run chromosome by chromosome · ee6d3c51
  Patrick Meidl authored 20 years ago
  
  ee6d3c51
Jun 10, 2004
- More fiddles · ddf57c9e
  Val Curwen authored 20 years ago
  
  ddf57c9e
- Minor fixes · 4c4d433c
  Val Curwen authored 20 years ago
  
  4c4d433c
- removed obsolete scripts · 4cac8efd
  Patrick Meidl authored 20 years ago
  
  4cac8efd
- renamed from vega_gene_density_calc.pl; does densities and stats now · 7d421ed2
  Patrick Meidl authored 20 years ago
  
  7d421ed2
- renamed to vega_gene_density.pl · 581c5e75
  Patrick Meidl authored 20 years ago
  
  581c5e75
- Last wrong branch fixcvs up -r 1.7 -p ProxyAdaptor.pm > ProxyAdaptor.pm · 7461f90c
  Ian Longden authored 20 years ago
  
  7461f90c
- Opps reverting back to previous version as i mean't to commit on the branch not here · d22e7d6e
  Ian Longden authored 20 years ago
  
  d22e7d6e
- Opps reverting back to prvious version as i mean't to commit on the brach not here · 26e6df85
  Ian Longden authored 20 years ago
  
  26e6df85
Jun 09, 2004
- Registry changes · aaba1dc1
  Ian Longden authored 20 years ago
  
  aaba1dc1
- exon has no p_value method so remove calls to thisxemacs TranscriptFactory.pm &! · 6486bfbc
  Ian Longden authored 20 years ago
  
  6486bfbc
- Sets HSP chr fileds to NULL when searches are removed to avoid contamination... · 154de031
  Will Spooner authored 20 years ago
```
Sets HSP chr fileds to NULL when searches are removed to avoid contamination with subsequent searches (e.g. in contigview)
```
  154de031
- added glovar SNP stats · d528572a
  Patrick Meidl authored 20 years ago
  
  d528572a
- glovar SNP density and stats script · 783bd998
  Patrick Meidl authored 20 years ago
  
  783bd998
- added the use for Exon, Translation and Transcript. · d50d525a
  Ian Longden authored 20 years ago
  
  d50d525a
- Removed unnecessary warning · d0789c26
  Graham McVicker authored 20 years ago
  
  d0789c26
- fixed test to reflect fact that seqedits are not currently enabled by default · 25c1dcfb
  Graham McVicker authored 20 years ago
  
  25c1dcfb
Jun 08, 2004
- Fixed documentation bug · 41e53dbb
  Jan-hinnerk Vogel authored 20 years ago
  
  41e53dbb
- branch to head · bc94e017
  Web Admin authored 20 years ago
  
  bc94e017
Jun 07, 2004
- get less Transcripts in fetch_all_by_Slice · 4b69737a
  Arne Stabenau authored 20 years ago
  
  4b69737a
Jun 02, 2004
- *** empty log message *** · f9ef546e
  Web Admin authored 20 years ago
  
  f9ef546e
- fixed bug in add_ExternalFeatureAdaptor() · 3795367e
  Patrick Meidl authored 20 years ago
  
  3795367e
- Fixed typo in get_all_DASFeatures · d5ffd29a
  Will Spooner authored 20 years ago
  
  d5ffd29a
Jun 01, 2004
- Added support for fugu (transferred changes from branch 19) · 1bc699b6
  Kevin Howe authored 20 years ago
  
  1bc699b6
May 27, 2004
- fetch_Featureset_by_Slice() now caches results · 6f6f334c
  Patrick Meidl authored 20 years ago
  
  6f6f334c
- Added adaptor/dbID test to get_DBEntries call · 94514a1d
  Will Spooner authored 20 years ago
  
  94514a1d
May 26, 2004
- Sequence Caching was unintentionally disabled · 0adfb533
  Graham McVicker authored 20 years ago
  
  0adfb533
- do not do translation modification if transcript edits are disabled · 96681820
  Graham McVicker authored 20 years ago
  
  96681820
- made translateable_seq() and translate() more careful about the possible absence of Translation · e4e065a5
  Graham McVicker authored 20 years ago
  
  e4e065a5
- changed POD: edits are disabled by default right now · 949abb12
  Graham McVicker authored 20 years ago
  
  949abb12
- added test for new Translation::fetch_all_by_Transcript_list method · a9cadf5c
  Graham McVicker authored 20 years ago
  
  a9cadf5c
- load all Translations at once if immediate loading is specified - slightly faster · 5356af43
  Graham McVicker authored 20 years ago
  
  5356af43
- changed fetch_all_by_Slice to allow immediate loading of exons rather than lazy-loading · 82ccd739
  Graham McVicker authored 20 years ago
  
  82ccd739
- POD changes · e30e41d0
  Graham McVicker authored 20 years ago
  
  e30e41d0