Created by: magaliruffier
Using one or more sentences, describe in detail the proposed changes. Retrieve RefSeq accessions for peptide when it is not stored as a stable ID
Describe the problem. Please provide an example representing the motivation behind the need for having these changes in place. For some species, the refseq_import format changes. The stable id is a randomly generated unique ID and the refseq accession is stored as an xref. The code was updated to deal with this change but only transcript accessions were correctly retrieved. This change deals with the peptide accessions.
If applicable, describe the advantages the changes will have. We have RefSeq accessions for peptides.
If applicable, describe any possible undesirable consequence of the changes.
Have you added/modified unit tests to test the changes? This was tested on the latest human refseq import in the new format and correctly stores the accessions and versions.
If so, do the tests pass/fail? The results are now as expected
Have you run the entire test suite and no regression was detected? NA