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Created with Raphaël 2.2.06Jul432126Jun2518171511103226May212019181387629Apr232117151397231Mar27262524231917161211224Feb191716131211109230Jan2726232221161514131298723Dec191615121110985432128Nov2726252422201817141211430Oct2928272322211614131098762129Sep23221918109854129Aug2827262221201918151211107130Jul24222117151093230Jun26251918163230May292321191514228Apr2423221614987428Mar2524211914131110327Feb26252119181714131210765Revert "ENSCORESW-1368: added align_type to protein_align_feature"ENSCORESW-1316: include version in CDS idENSCORESW-1316: no version for prediction exonsENSCORESW-1316: use Vega% xref, not OTTTENSCORESW-1316: test data updatedENSCORESW-1316: delete id key as wellENSCORESW-1316: add gencode specific fieldsENSCORESW-1316: add havana_gene field to summaryENSCORESW-1316: add version to ID fieldadd more fields for GFF3 formatENSCORESW-1368: added align_type to protein_align_featureENSCORESW-1368: consistent namingENSCORESW-1368: alignments can be something else than ensembl cigarMerge branch 'master' of https://github.com/Ensembl/ensembldon't store duplicated synonymsENSCORESW-1276: don't store duplicated synonymsENSCORESW-1276: don't store duplicated synonymsmissing commaENSCORESW-1276: limit duplicated synonym copyinguse consistent variable namesMerge pull request #71 from Ensembl/feature/switchable_adaptorsDocs were not clear about the callback. ImprovedENSCORESW-1362: process all ensembl_ids for a given xrefENSCORESW-469: add Gene3D and Panther sourcesignore GOs if status is not DUMP_OUTthere is not always an identity_xrefcompara not included any moreFixing typo sequenceMerge branch 'feature/switchable_adaptors' into experimental/alternative_sequence_storesFixing some problems with implementation and writing a testMerge branch 'feature/switchable_adaptors' into experimental/alternative_sequence_storesadding in tests for alternative storeDelegate to the faidx object for checking seq region existence.Merge branch 'feature/switchable_adaptors' of https://github.com/Ensembl/ensembl into feature/switchable_adaptorsMissed a $registry variable instead of using $REGISTRY.[ENSCORESW-578]. First commit of the switchable adaptors.Merge branch 'master' of https://github.com/Ensembl/ensemblENSCORESW-1347: set havana status on genes/transcripts which are not known through accepted sourcesmispellt coordinateAdd missing bracket to StrainSliceAdaptor