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Created with Raphaël 2.2.022Mar21171332128Feb2722151487131Jan30272625241817965415Dec139829Nov2421181611974228Oct2120141311754329Sep272623222120161514131286231Aug2625221918171615121153227Jul2521201911875128Jun2423171614109732131May2524171611109654329Apr251913118531Mar232118161510225Feb2423191817161512429Jan2625222118151211875418Dec151411108432130Nov272625242320191817161211109228Oct272221201916151386124Sep23222117161514111098432127Aug2012111075432131Jul302827some misformatted entries in RefSeq data[ENSCORESW-368]. Talked to Web, can get rid of redundant method.Merge pull request #186 from Zhicheng-Liu/newtask/ENSEMBL-4764fix: use write credentials for creating indicesUpdates to be able to run stable id mapping in EBI-farmAltered Genbank dumper so ENST is places in a:Merge pull request #185 from thibauthourlier/patch-2Try to use the driver's escape characterSQLite needs only one backslash where MySQL needs twoUpdate SliceAdaptor.pmEscape seq_region_name before querying the synonymsMerge branch 'master' of https://github.com/Ensembl/ensembl[ENSCORESW-2129]. Added POD.ENSCORESW-2194: throw if coordinates missingENSCORESW-2195: seq_region_start/end methods for UTR and CDS[ENSCORESW-2129]. Input and configuration files.[ENSCORESW-2129]. Script to programmatically create release tasks and sub-tasks in JIRA at EBI.added separate target user/passMerge pull request #184 from james-monkeyshines/masterMerge pull request #182 from willmclaren/masterupdate example with new ftp urlDo not skip first mappinguse port from configMerge branch 'master' of https://github.com/Ensembl/ensembluse port from configurationMerge pull request #183 from willmclaren/feature/generic-seqregionsynonym-adaptorMake SeqRegionSyonymAdaptor compatible with BaseAdaptorUpdated README for stable_id_lookup to include -create_index optionupdated README to include -create_index optionMerge branch 'master' of https://github.com/Ensembl/ensemblnew EBI server settingsENSCORESW-369: column count was wrongUpdated tables.sql to remove index creation while creating tables and READMEENSCORESW-1731: remove mislinked synonymsadd new staging port, not 3306 any moreMerge branch 'master' of https://github.com/Ensembl/ensembladd port, defaults to staging oneignore some dodgy transcript namesENSCORESW-369: checksum the checksum correctlyMerge pull request #181 from epaule/master