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ensembl-gh-mirror
zmap
Commits
10f1c0f2
Commit
10f1c0f2
authored
15 years ago
by
rds
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parent
9063bc8e
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1 changed file
src/include/ZMap/zmapFeature.h
+14
-3
14 additions, 3 deletions
src/include/ZMap/zmapFeature.h
with
14 additions
and
3 deletions
src/include/ZMap/zmapFeature.h
+
14
−
3
View file @
10f1c0f2
...
...
@@ -25,9 +25,9 @@
* Description: Data structures describing a sequence feature.
*
* HISTORY:
* Last edited: May 8 1
4:36
2009 (
edgrif
)
* Last edited: May 8 1
6:52
2009 (
rds
)
* Created: Fri Jun 11 08:37:19 2004 (edgrif)
* CVS info: $Id: zmapFeature.h,v 1.15
6
2009-05-08 1
4:45:25 edgrif
Exp $
* CVS info: $Id: zmapFeature.h,v 1.15
7
2009-05-08 1
5:53:20 rds
Exp $
*-------------------------------------------------------------------
*/
#ifndef ZMAP_FEATURE_H
...
...
@@ -897,7 +897,16 @@ char *zMapFeatureGetDNA(ZMapFeatureAny feature_any, int start, int end, gboolean
char
*
zMapFeatureGetFeatureDNA
(
ZMapFeatureContext
context
,
ZMapFeature
feature
)
;
char
*
zMapFeatureGetTranscriptDNA
(
ZMapFeatureContext
context
,
ZMapFeature
transcript
,
gboolean
spliced
,
gboolean
cds_only
)
;
char
*
zMapFeatureDNAFeatureName
(
ZMapFeatureBlock
block
);
gboolean
zMapFeatureDNACreateFeatureSet
(
ZMapFeatureBlock
block
,
ZMapFeatureSet
*
feature_set_out
);
void
zMapFeatureDNAAddSequenceData
(
ZMapFeature
dna_feature
,
char
*
dna_str
,
int
sequence_length
);
ZMapFeature
zMapFeatureDNACreateFeature
(
ZMapFeatureBlock
block
,
ZMapFeatureTypeStyle
style
,
char
*
dna_str
,
int
sequence_length
);
void
zMapFeature3FrameTranslationSetCreateFeatures
(
ZMapFeatureSet
feature_set
,
ZMapFeatureTypeStyle
style
);
void
zMapFeature3FrameTranslationSetRevComp
(
ZMapFeatureSet
feature_set
,
int
origin
);
GArray
*
zMapFeatureAnyAsXMLEvents
(
ZMapFeatureAny
feature_any
,
/* ZMapFeatureXMLType xml_type */
...
...
@@ -912,4 +921,6 @@ gboolean zMapFeatureAnyHasMagic(ZMapFeatureAny feature_any);
ZMapFeatureAny
zMapFeatureContextFindFeatureFromFeature
(
ZMapFeatureContext
context
,
ZMapFeatureAny
from_feature
);
#endif
/* ZMAP_FEATURE_H */
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