Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
Z
zmap
Manage
Activity
Members
Labels
Plan
Issues
0
Issue boards
Milestones
Iterations
Wiki
Requirements
Jira
Code
Merge requests
0
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Locked files
Build
Pipelines
Jobs
Pipeline schedules
Test cases
Artifacts
Deploy
Releases
Package Registry
Container Registry
Operate
Environments
Terraform modules
Monitor
Incidents
Service Desk
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Code review analytics
Issue analytics
Insights
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Terms and privacy
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
ensembl-gh-mirror
zmap
Commits
9c699ec0
Commit
9c699ec0
authored
17 years ago
by
zmap
Browse files
Options
Downloads
Patches
Plain Diff
fix doc
parent
0dcf4248
No related branches found
Branches containing commit
No related tags found
Tags containing commit
No related merge requests found
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
doc/xremote_overview.shtml
+78
-8
78 additions, 8 deletions
doc/xremote_overview.shtml
with
78 additions
and
8 deletions
doc/xremote_overview.shtml
+
78
−
8
View file @
9c699ec0
...
...
@@ -96,15 +96,59 @@ understands.
<action>close</action>
</client>
</response>
<meta display="localhost:10.0" windowid="0x2c00004" application="" version="$Revision: 1.
3
$" />
<meta display="localhost:10.0" windowid="0x2c00004" application="" version="$Revision: 1.
4
$" />
</zmap>
</pre>
<p>
From the above examples I hope it's easy to see how the following
table
of action
s fit
s
in.
tables fit in.
</p>
<h2>Table of Windows and valid Actions</h2>
<table class="zmap_actions">
<tr>
<th>Window</th>
<th>Description</th>
<th>Actions accepted</th>
</tr>
<tr>
<td>application window</td>
<td>zmap initially starts with a window to get input from the user
as to which sequence to display. This may be hidden by configuration
in ~/.ZMap/ZMap. N.B. No register_client is available as zmap must be
started with --win_id option to register a client.</td>
<td>new_zmap<br />shutdown</td>
</tr>
<tr>
<td>display window</td>
<td>This is the top level window in which the different views are shown.</td>
<td>new_view<br />zoom_in<br />zoom_out<br />register_client</td>
</tr>
<tr>
<td>view window</td>
<td>A sub window of the display top level and conceptually exists
as one per sequence region</td>
<td>new_window<br />
find_feature<br />
create_feature<br />
delete_feature<br />
single_select<br />
multiple_select<br />
unselect<br />
list_windows<br />
register_client</td>
</tr>
<tr>
<td>sequence window</td>
<td>This is a sub window of the view window and actually displays the sequence.</td>
<td>zoom_to<br />register_client</td>
</tr>
</table>
<br />
<h2>Table of Actions</h2>
<table class="zmap_actions">
...
...
@@ -128,18 +172,25 @@ table of actions fits in.
<!-- new -->
<tr>
<td>new</td>
<td>create a new
view
window</td>
<td>new
_zmap
</td>
<td>create a new
display
window</td>
<td><pre class="request">
<zmap action="new">
<zmap action="new
_zmap
">
<segment sequence="20.3013641-3258367" start="1" end="0"/>
</zmap></pre>
<pre class="response">
<zmap>
<response>
<zmapid>ZMap.1</zmapid>
<windowid>0x123456</windowid>
<client xwid="0x2c00084" >
<action>zoom_in</action>
<action>zoom_out</action>
<action>new_view</action>
<action>register_client</action>
</client>
</response>
<meta display="localhost:10.0"
windowid="0x2c00004"
application=""
version="$Revision: 1.4 $" />
</zmap></pre></td>
</tr>
...
...
@@ -283,6 +334,25 @@ url = "acedb://any:any@localhost:12345"
featuresets = "Coding Repeats BLASTX"
}
</segment>
</zmap></pre>
<pre class="response">
<zmap>
<client xwid="0x2c00234" >
<action>new_window</action>
<action>find_feature</action>
<action>create_feature</action>
<action>delete_feature</action>
<action>single_select</action>
<action>multiple_select</action>
<action>unselect</action>
<action>list_windows</action>
<action>register_client</action>
</client>
</response>
<meta display="localhost:10.0"
windowid="0x2c00084"
application=""
version="$Revision: 1.4 $" />
</zmap></pre></td>
</tr>
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment