move zmapUtilsDNA.[ch] to zmapFASTA.[ch]

src/include/Makefile.am

@@ -9,6 +9,8 @@ ZMap/zmapFeature.h \
 ZMap/zmapGFF.h \
 ZMap/zmapManager.h \
 ZMap/zmapNavigator.h \
+ZMap/zmapPeptide.h \
+ZMap/zmapFASTA.h \
 ZMap/zmapReadLine.h \
 ZMap/zmapServer.h \
 ZMap/zmapServerProtocol.h \

src/include/ZMap/zmapFASTA.h

-/*  File: zmapUtilsDNA.h
+/*  File: zmapFASTA.h
  *  Author: Ed Griffiths (edgrif@sanger.ac.uk)
- *  Copyright (c) Sanger Institute, 2005
+ *  Copyright (c) Sanger Institute, 2006
  *-------------------------------------------------------------------
  * ZMap is free software; you can redistribute it and/or
  * modify it under the terms of the GNU General Public License
@@ -20,15 +20,14 @@
  * This file is part of the ZMap genome database package
  * originated by
  * 	Ed Griffiths (Sanger Institute, UK) edgrif@sanger.ac.uk,
- *      Roy Storey (Sanger Institute, UK) rds@sanger.ac.uk,
- *      Rob Clack (Sanger Institute, UK) rnc@sanger.ac.uk
+ *      Roy Storey (Sanger Institute, UK) rds@sanger.ac.uk
  *
- * Description: 
+ * Description: Interface to FASTA routines.
  *
  * HISTORY:
- * Last edited: Mar 17 16:16 2006 (edgrif)
- * Created: Tue Nov  8 15:23:27 2005 (edgrif)
- * CVS info:   $Id: zmapFASTA.h,v 1.1 2006-03-17 16:19:07 edgrif Exp $
+ * Last edited: Mar 17 16:59 2006 (edgrif)
+ * Created: Fri Mar 17 16:59:08 2006 (edgrif)
+ * CVS info:   $Id: zmapFASTA.h,v 1.2 2006-03-17 17:00:13 edgrif Exp $
  *-------------------------------------------------------------------
  */
 #ifndef ZMAP_UTILS_DNA_H

src/lib/Makefile.am

@@ -65,12 +65,13 @@ libZMap_a_SOURCES = $(top_srcdir)/zmapConfig/zmapConfig.c \
 	$(top_srcdir)/zmapUtils/zmapConfigDir.c \
 	$(top_srcdir)/zmapUtils/zmapConfigDir_P.h \
 	$(top_srcdir)/zmapUtils/zmapFileUtils.c \
-	$(top_srcdir)/zmapUtils/zmapDNAUtils.c \
+	$(top_srcdir)/zmapUtils/zmapFASTA.c \
 	$(top_srcdir)/zmapUtils/zmapGUIutils.c \
 	$(top_srcdir)/zmapUtils/zmapGUImenus.c \
 	$(top_srcdir)/zmapUtils/zmapGLibUtils.c \
 	$(top_srcdir)/zmapUtils/zmapHandle.c \
 	$(top_srcdir)/zmapUtils/zmapLogging.c \
+	$(top_srcdir)/zmapUtils/zmapPeptide.c \
 	$(top_srcdir)/zmapUtils/zmapReadLine.c \
 	$(top_srcdir)/zmapUtils/zmapReadLine_P.h \
 	$(top_srcdir)/zmapUtils/zmapUtils.c \

src/zmapUtils/zmapFASTA.c

@@ -26,15 +26,15 @@
  *
  * Exported functions: See ZMap/zmapFASTA.h
  * HISTORY:
- * Last edited: Mar 17 16:25 2006 (edgrif)
+ * Last edited: Mar 17 16:36 2006 (edgrif)
  * Created: Fri Mar 17 16:24:30 2006 (edgrif)
- * CVS info:   $Id: zmapFASTA.c,v 1.1 2006-03-17 16:25:52 edgrif Exp $
+ * CVS info:   $Id: zmapFASTA.c,v 1.2 2006-03-17 17:00:13 edgrif Exp $
  *-------------------------------------------------------------------
  */
 
 #include <string.h>
 #include <ZMap/zmapUtils.h>
-#include <ZMap/zmapUtilsDNA.h>
+#include <ZMap/zmapFASTA.h>
 
 
 /* THIS FILE WOULD BE BETTER NAMED zmapFASTAUtils.c....perhaps I will change it... */