new zmap release notes for 2 December 2009

doc/Release_notes/release_notes.2009_12_02.shtml

+<!-- File automatically generated. Do not edit. --!>
+
+<!--#set var="banner" value="ZMap Release Notes For ' 2 December 2009'" -->
+<!--#include virtual="/perl/header" -->
+<!--#set var="author" value="edgrif@sanger.ac.uk" -->
+
+<!-- The release version, etc... --!>
+
+<h5>Release Version: ZMap 0.1.73 </h5>
+
+
+<h5>Release Date:  2 December 2009</h5>
+
+
+<p>
+(Last release was on 30/11/2009)
+</p>
+
+<h5>Request Tracker Tickets Resolved</h5>
+<br />
+<!-- Now the resolved tickets... --!>
+
+<!-- Finished getting the resolved request tracker tickets --!>
+
+<!-- End of tickets  --!>
+
+<fieldset>
+<legend>ZMap Changes/Fixes [from cvs]</legend>
+
+<ul>
+  <li><!-- --- Start editing ZMap changes here... --- --!>
+    <a href="http://cvs.internal.sanger.ac.uk/cgi-bin/viewcvs.cgi/ZMap/?root=zmap">Browse CVS</a>
+
+  </li>
+  <li> src/zmapUtils/zmapConfigLoader.c: added scripts-dir to [ZMap]
+	  ...configKeyEntryStruct
+
+
+  </li>
+  <li> src/zmapGFF/zmapGFF_P.h: add code to allow separate parsing of
+	  sequence from file.
+
+
+  </li>
+  <li> src/zmapGFF/zmapGFF2parser.c: add code to parse sequence
+	  separately and simplify handling of parser state/errors.
+
+
+  </li>
+  <li> src/zmapGFF/gffparser.c: fix up create call for new params.
+
+
+  </li>
+  <li> src/include/ZMap/zmapGFF.h: create parser without args now, add
+	  feature args later.
+
+
+  </li>
+  <li> src/zmapServer/pipe/pipeServer.c: fix up code for new GFF parser
+	  args.
+
+
+  </li>
+  <li> src/zmapServer/acedb/acedbServer.c: fix up for new GFF parser
+	  args.
+
+
+  </li>
+  <li> src/zmapServer/file/fileServer.c: fix up context call, was wrong,
+	  also sequence getting call, but this is still bugged cvs diff
+	  zmapServer/file/fileServer.c double free somewhere.
+
+
+  </li>
+  <li> src/zmapServer/zmapServerProtocolHandler.c: do return an error if
+	  getting dna is unsupported, just return a message.
+
+
+  </li>
+  <li> src/zmapWindow/zmapWindowColBump.c: fix bump handling when bump
+	  not set yet.
+
+
+  </li>
+  <li> src/zmapWindow/zmapWindowFeature.c: remove faulty setting of
+	  sequence size, it is _not_ the window size.
+
+
+  </li>
+  <li> src/zmapWindow/zmapWindowItemFactory.c: fix bug in feature
+	  sizing, must be _relative_ to block.
+
+
+  </li>
+  <li> src/zmapWindow/items/zmapWindowTextFeature.c: fix text colouring
+	  for text.
+
+
+  </li>
+  <li> src/include/ZMap/zmapConfigStrings.h: fix missing dec.
+
+
+  </li>
+  <li> doc/Release_notes/release_notes.2009_11_30.shtml: new zmap
+	  release notes for 30 November 2009
+
+
+  </li>
+  <li> src/include/ZMap/zmapWebPages.h: update release notes file to
+	  release_notes.2009_11_30.shtml
+
+
+  </li>
+  <li> doc/Release_notes/LAST_RELEASE_DATE.txt: update last release
+	  notes to 30/11/2009
+
+
+  </li>
+  <li> src/zmapUtils/zmapUtils_P.h:
+	  /var/tmp/zmap.16332/ZMap/scripts/versioner run by zmap
+
+    <!-- --- End editing ZMap changes here... --- --!>
+  </li>
+</ul>
+</fieldset>
+<br />
+<fieldset>
+<legend>Aceb Changes/Fixes [from cvs]</legend>
+<ul>
+  <li><!-- --- Start editing ACeDB changes here... --- --!>
+    <a href="http://cvs.internal.sanger.ac.uk/cgi-bin/viewcvs.cgi/acedb/?root=acedb">Browse CVS</a>
+
+  </li>
+  <li> w9/blxview.c: Fixed a bug where text in highlighted rows was not
+	  visible. Also made a change to allow coords in the input file to
+	  be either way round for the match sequence (because acedb and
+	  zmap currently output them different ways for reversed strands).
+
+    <!-- --- End editing ACeDB changes here... --- --!>
+  </li>
+</ul>
+</fieldset>
+<br />
+
+<!--#include virtual="/perl/footer" -->
+