Commits · d2152510ff6c4a6ef845cfd61d347113e6cdebc1 · ensembl-gh-mirror / zmap

This project is mirrored from https://:*****@github.com/Ensembl/zmap.git. Pull mirroring updated 10 minutes ago.

Nov 07, 2006
- add code to support a slop factor for perfect gapped aligns. · d2152510
  edgrif authored 18 years ago
  
  d2152510
Oct 06, 2006
- add missing header include. · 6a0f99e9
  edgrif authored 18 years ago
  
  6a0f99e9
Sep 26, 2006
- fix small glitch in hard coded 3 frame name. · 7cb65003
  edgrif authored 18 years ago
  
  7cb65003
Aug 01, 2006
- add splice data to features · 37ddc8b9
  edgrif authored 18 years ago
  
  37ddc8b9
Jul 25, 2006
- removed sequence pointer from context (yippee) · 04aa7e28
  rds authored 18 years ago
```
and hence new function zMapFeatureBlockDNA
```
  04aa7e28
Jul 22, 2006
- small change in case a parent in NULL · 308d998f
  rds authored 18 years ago
  
  308d998f
Jun 30, 2006
- get 3 frame translation · 552a3de7
  rds authored 18 years ago
  
  552a3de7
Jun 28, 2006
- remove the hash table of styles for features, we hold it in the canvas items now. · b1cb1d47
  edgrif authored 18 years ago
  
  b1cb1d47
Jun 22, 2006
- add function to add locus info. to a feature. · 4870c10c
  edgrif authored 18 years ago
  
  4870c10c
Jun 16, 2006
- Add code to cache feature styles in the feature set plus code to copy styles. · df388cf7
  edgrif authored 18 years ago
  
  df388cf7
Jun 14, 2006
- add calls to get/set overlap mode in style + set style for feature set. · b9dfdb78
  edgrif authored 18 years ago
  
  b9dfdb78
May 19, 2006
- add function to return name of any feature. · 388f867c
  edgrif authored 18 years ago
  
  388f867c
Mar 23, 2006
- add functions to support adding urls to features. · 399009b9
  edgrif authored 19 years ago
  
  399009b9
Mar 21, 2006
- Fix wierd typo in struct name and add structtype2text function. · b21db111
  edgrif authored 19 years ago
  
  b21db111
Feb 17, 2006
- changed zmapFeatureCreateEmpty -> zMapFeatureCreateEmpty · 780fdce9
  rds authored 19 years ago
```
and added zMapFeatureCreateFromStandardData
```
  780fdce9
Jan 13, 2006
- add functions to validate feature poitners, add features to sets, remove features. · 50e967e6
  edgrif authored 19 years ago
  
  50e967e6
Nov 24, 2005
- remodel feature create calls to allow adding of transcript or homol data more easily. · 1405b2ae
  edgrif authored 19 years ago
  
  1405b2ae
Nov 18, 2005
- change to have only 3 feature types. Improve handling of exons/introns in augment features. · 18992c86
  edgrif authored 19 years ago
  
  18992c86
Nov 16, 2005
- accomodate sequence struct -> pointer change · 7bec6e32
  rds authored 19 years ago
  
  7bec6e32
Nov 08, 2005
- correct variable names (appended _out) · 680484a9
  rds authored 19 years ago
  
  680484a9
- add function to return dna details from context.zmapFeature/zmapFeature.c · de66a0e9
  edgrif authored 19 years ago
  
  de66a0e9
Sep 30, 2005
- incorporate change to feature structs. · 4e297bd5
  edgrif authored 19 years ago
  
  4e297bd5
Sep 20, 2005
- zmap -> zMap · 05dd919f
  rds authored 19 years ago
  
  05dd919f
Sep 09, 2005
- put back the old code for now · 506511e9
  edgrif authored 19 years ago
  
  506511e9
- change g_new to g_new0 · d9721421
  edgrif authored 19 years ago
  
  d9721421
Aug 09, 2005
- Move style out of feature set into features so style is indepenent of feature_set. · bbb590f5
  edgrif authored 19 years ago
  
  bbb590f5
Jul 27, 2005

Make all feature structs have unique_id + original_id and add an... · bd8816e7

edgrif authored 19 years ago

Make all feature structs have unique_id + original_id and add an AnyFeatureStruct for general handling of features.

bd8816e7

Jul 04, 2005
- reoganisation of BlockCreate & BlockCreateID. · 3c181bec
  rds authored 19 years ago
  
  3c181bec
Jun 27, 2005
- tidy up block/align funcs. · 3ef8b556
  edgrif authored 19 years ago
  
  3ef8b556
Jun 24, 2005
- add structs/code to support alignments and blocks and better hashing from... · c611e7c3
  edgrif authored 19 years ago
```
add structs/code to support alignments and blocks and better hashing from feature context to canvas items.
```
  c611e7c3
- added homology gap handling for calling blixem · 9e37d80d
  rnc authored 19 years ago
  
  9e37d80d
May 27, 2005
- about half the changes required to add multiple alignments. · 16884c89
  edgrif authored 19 years ago
  
  16884c89
Apr 05, 2005
- change code to use quarks, not strings, introduce original vs. unique strings... · b04e580b
  edgrif authored 19 years ago
```
change code to use quarks, not strings, introduce original vs. unique strings for features and sets.
```
  b04e580b
Jan 07, 2005
- comment out debugging code. · a312f8e9
  edgrif authored 20 years ago
  
  a312f8e9
Dec 13, 2004
- change some feature context struct names. · e22ef9df
  edgrif authored 20 years ago
  
  e22ef9df
Nov 22, 2004
- redo earlier changes overwritten by robs checkin. · b75d7dbd
  edgrif authored 20 years ago
  
  b75d7dbd
- add code from zmapView to this directory where it belongs. · 03da6eea
  edgrif authored 20 years ago
  
  03da6eea
- Applied coding standards: one return stmt, assert on return value, etc · 3caf6209
  rnc authored 20 years ago
  
  3caf6209
Nov 19, 2004
- add zMapFeatureCreateID() and zMapFeatureSetCoords() functions for handling... · e1413922
  edgrif authored 20 years ago
```
add zMapFeatureCreateID() and zMapFeatureSetCoords() functions for handling feature datalist ids and coordinates.
```
  e1413922
Nov 15, 2004
- move line initialisation inside if blocks · 5f427438
  rnc authored 20 years ago
  
  5f427438