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EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

IMPC publications curation app

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

sra-xml project

Data Model including dao and repositories of the PDX Finder app

Generic library for accessioning any type of object

This project is required as dependency for all Textmining API component projects and act as common utility project.

Core ingest service components, including minimal metadata representation and caching

XML schemas published by ENA.