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A CLI-supported framework that streamlines writing and deployment of Kubernetes configurations to multiple clusters.

Demo for workshop 2019-09-04

https://tsi-ccdoc.readthedocs.io/en/latest/ResOps/2019/gitlab/02_create-sample-project.html

Compute the distribution of reads on genomic locations; compute the coverage of repeat elements for each cell barcode; extract the reads spanning splicing junctions

split paired FASTQ files into chunks of nseq sequences

Extract groups of sequences sharing the same barcode using a graph approach

An Ansible playbook for automated deployment of full-stack Plone servers.