Explore projects
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Benchmarking dataset of PDB structures (various molecule types, experimental methods, weird cases etc.).
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ChEMBL / ChEBI / ChEBI-2.0 / Chebi Ontology Generator
Creative Commons Attribution 4.0 InternationalData pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.
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Manuscript submission system project (Europe PMC plus)
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Microbiome Informatics / emg-viral-pipeline
Apache License 2.0VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
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A simple API that runs delayed jobs. It allows to submit a job and check it's status. When a job finishes it saves the results in the NFS.
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This project defines a delayed job that runs structure searches (similarity, substructure, connectivity).
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ensembl-gh-mirror / Bio-DB-HTS
Apache License 2.0Git repo for Bio::DB::HTS module on CPAN, providing Perl links into HTSlib
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ebiwd / EBI-Icon-fonts
Apache License 2.0A collection of functional and scientific icons for EMBL-EBI sites.
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ensembl-gh-mirror / format-transcriber
Apache License 2.0File conversion utility for the ftp redesign project
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UniProt Public / UniFIRE
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mouse-informatics / gwas-opentargets-integration
Apache License 2.0Updated -
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
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