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A solution to enable building and managing a Spark/Hadoop cluster on the EMBL-EBI Codon Slurm HPC cluster
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GDP-Public / fraposa pgsc
MIT LicenseUpdated -
Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.
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Image to update FPSim2 fingerprints table. It can be used in all our services.
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Job that generates an image of a heatmap to use it as a guide for the visualisation.
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GDP-Public / pgscatalog_utils
Apache License 2.0Updated -
This repo contains the code to analyse the data for assemblies manuscript
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This repo contains the code to analyse the data for assemblies manuscript
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Microbiome Informatics / emg-viral-pipeline
Apache License 2.0VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
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Django package containing chebi models.
archived 2Updated -
ETL to migrate data from the old database to the new one
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Literature-services / public-projects / ROR Proto EMBL
GNU General Public License v3.0 or laterUpdated -
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Literature-services / public-projects / ML EMBL Publication Project
Apache License 2.0Updated -