Explore projects

A nextflow pipeline for polygenic score calculation

RNAcentral website source code

Metadata API for ensembl 2020

This is the codebase for PDBe-KB REST API service

This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.

ETL to migrate data from the old database to the new one

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Project to perform the data indexation process to the ChEBI platform

The Ensembl Core Perl API and SQL schema

HoloFood is a project investigating sustainable food production through hologenomics. This Django app is the data portal where samples and other datasets from the project are made publicly available.

EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

A basic Python-based EGA download client

A Python package to extract, annotate and manipulate catalytic site entities using raw info from the M-CSA API