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Git repo for Bio::DB::HTS module on CPAN, providing Perl links into HTSlib

BioBert model trained on EPMC dataset for NER task

Biocuration 2019

Deployment scripts to run the Bioexcel Binder service.

This project defines a delayed job that runs biological sequence searches (BLAST).

Contenxtual Annotations Pipeline with Tagging and Linking (CAPITAL)

ChEBI data in different formats: TSV, SDF and SQL Dumps

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Program for generating the contact map difference between two distinct structures with (for now) the same sequence.

A simple API that runs delayed jobs. It allows to submit a job and check it's status. When a job finishes it saves the results in the NFS.

DIA-reanalysis pipeline code and results