email taggers - ongoing

server/ftp-integration/taggedXML.js

@@ -7,12 +7,18 @@ const db = require('../utils/db.js')
 const { execSync } = require('child_process')
 const uuidv4 = require('uuid/v4')
 const config = require('config')
+const manuscriptModel = require('../xpub-model/entities/manuscript/data-access')
 
 const ftpTagger = config.get('ftp_tagger')
+const { taggerEmail } = require('../email')
 
+const parentRootPath = '/home/yogmatee/projects/PLAY/chokidar/ftp_mock'
+
+/*
 const parentRootPath = `${process.env.HOME}/${config.get('ftp_directory')}/${
   ftpTagger.username
 }`
+*/
 
 const rootPath = `${parentRootPath}/Done`
 
@@ -90,6 +96,16 @@ async function processFile(path) {
     await files.renameFile(path)
 
     logger.info('Uploading to Minio and the database has been completed.')
+
+    const manuscriptObj = await manuscriptModel.getManuscriptById(manuscriptId)
+
+    // send email to taggers
+    /* taggerEmail(
+      'yroochun@ebi.ac.uk', //ftpTagger.email,
+      manuscriptId,
+      manuscriptObj[0]['meta,title'],
+      `${path} has been processed.`,
+    )*/
   } catch (err) {
     logger.error('Error', err.message)
   }

server/xpub-model/entities/manuscript/data-access.js

@@ -383,6 +383,11 @@ class Manuscript extends EpmcBaseModel {
     return manuscripts && manuscripts.length > 0 ? manuscripts[0] : null
   }
 
+  static async getManuscriptById(id) {
+    const manuscript = Manuscript.query().where('manuscript.id', id)
+    return manuscript
+  }
+
   static async selectByPdfDepositStatesNull() {
     const manuscripts = Manuscript.query()
       .whereNull('pdf_deposit_state')