Merge branch 'shared-data-model' of gitlab.coko.foundation:xpub/xpub-epmc into shared-data-model

server/ncbi-integration/publishedCheck.js

@@ -29,6 +29,9 @@ async function publishedCheck() {
       const manuscript4Db = new Manuscript(manuscript)
       delete manuscript4Db.users
       await manuscript4Db.save()
+      logger.info(
+        `Status of manuscript ${manuscript.id} was changed to 'published'`,
+      )
       sendEmails(manuscript)
     }
   }
@@ -88,6 +91,11 @@ function sendEmails(manuscript) {
       user.identities
         .filter(identity => !identity.deleted)
         .forEach(identity => {
+          logger.info(
+            `Emailing ${identity.email} about their published manuscript ${
+              manuscript.id
+            }.`,
+          )
           manuscriptHasBeenPublishedEmail(
             identity.email,
             `PMC${pmcid}: ${manuscript['meta,title']}`,

server/xpub-model/entities/manuscript/helpers/transform.js

@@ -58,7 +58,7 @@ const gTeams = model =>
 
 // Transform from Database model to GraphQL data
 const gManuscript = model => {
-  const keys = Object.keys(model)
+  const keys = Object.keys(model).filter(key => model[key])
   const manuscript = {}
   manuscript.meta = {}
   keys.forEach(k => {