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Nextflow

Martin Beracochea requested to merge nextflow into master

Created by: hoelzer

  • init all files necessary for the Nextflow execution
  • nextflow.config, bin (with the scripts) and virify.nf need to be in the root dir of the repository because otherwise
nextflow run EBI-Metagenomics/emg-viral-pipeline --fasta some.fasta

is not working.

The folder holding the scripts needs to be named bin. Maybe this will be changed in a future release of Nextflow.

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