Commits · 4ac338e1e9a9d5347a7877be9475892d2b4fa5fa · ensembl-gh-mirror / ensembl-hive · GitLab

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This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated 17 minutes ago.

Jan 25, 2013
- resolving conflict: using mine · 4ac338e1
  Leo Gordon authored 12 years ago
  
  4ac338e1
- diagram improvement: (1) no more "empty boxes" and (2) tables dataflown from a... · 50066325
  Leo Gordon authored 12 years ago
  50066325
Jan 15, 2013
- Table dataflows are now included into semaphore boxes (bugfix: wrong internal name) · 924d002d
  Matthieu Muffato authored 12 years ago
  
  924d002d
Jan 14, 2013
- Added a new presentation, moved presentations into a separate folder. · af7da3a7
  Leo Gordon authored 12 years ago
  
  af7da3a7
Jan 11, 2013
- cosmetic fix: commented back the debug output that was left uncommented by mistake · c643f1ca
  Leo Gordon authored 12 years ago
  
  c643f1ca
- Added coloured barchart display option and jobs/data display option (no big... · 2796654c
  Leo Gordon authored 12 years ago
  2796654c
Jan 10, 2013
- injected a padding around the pipeline diagram · 426e9d67
  Leo Gordon authored 12 years ago
  
  426e9d67
Jan 04, 2013
- send the fatal "COULDNT CREATE WORKER" message to stderr instead of stdout · dfff9ea4
  Leo Gordon authored 12 years ago
  
  dfff9ea4
- added command line options -submit_stdout_file and -submit_stderr_file to peek... · 35458247
  Leo Gordon authored 12 years ago
  35458247
- using PERLs File::Path::make_path instead of mkdir-p to create hive_log_dir · 02e233e1
  Leo Gordon authored 12 years ago
  
  02e233e1
- added a LongMult pipeline diagram in completed state (for easier reference) · ede79d41
  Leo Gordon authored 12 years ago
  
  ede79d41
Dec 17, 2012
- fixed a bug in computing num_required_workers according to the new rules... · 64c72bf7
  Leo Gordon authored 12 years ago
  64c72bf7
Dec 12, 2012
- bugfix: correctly checking analysis_capacity (thanks Andy for reporting) · 02f6c938
  Leo Gordon authored 12 years ago
  
  02f6c938
- bugfix: do not proceed with negative numbers of workers for submission (thanks... · e781f17d
  Leo Gordon authored 12 years ago
  e781f17d
Dec 06, 2012
- bugfix: -job_limit now works correctly also with respecializing workers · 0a83ea39
  Leo Gordon authored 12 years ago
  
  0a83ea39
- fix: 'msg' view now displays the analysis of the job (which is fixed), not... · d05ffb98
  Leo Gordon authored 12 years ago
  d05ffb98
Dec 05, 2012
- experimental feature: re-specialization of workers instead of dying from NO_WORK · 74244f5e
  Leo Gordon authored 12 years ago
  
  74244f5e
Dec 01, 2012
- switched to using Limiter class for job_limit and made some related structural changes · 9ddf43b2
  Leo Gordon authored 12 years ago
  
  9ddf43b2
Nov 30, 2012
- changed the meaning of 'num_required_workers' to "total estimated number of... · bb6d6ca9
  Leo Gordon authored 12 years ago
  bb6d6ca9
Nov 29, 2012
- fresh schema diagram · 2a72b4ce
  Leo Gordon authored 12 years ago
  
  2a72b4ce
- renamed 'job_message' table to 'log_message' and JobMessageAdaptor to LogMessageAdaptor everywhere · 7a293d7e
  Leo Gordon authored 12 years ago
  
  7a293d7e
Nov 28, 2012
- swapped hive_capacity for analysis_capacity in example PipeConfig files · 2a3982de
  Leo Gordon authored 12 years ago
  
  2a3982de
- change of default behaviour: hive_capacity is now off by default (=NULL);... · c540fa9e
  Leo Gordon authored 12 years ago
  c540fa9e
- cleanup: removed runnable(), output() and parameters() subroutines from... · c704cbc3
  Leo Gordon authored 12 years ago
  c704cbc3
- removed the "compile_module_once" option as the only way to compile modules... · 39726aa3
  Leo Gordon authored 12 years ago
  39726aa3
Nov 27, 2012
- secutiry: make sure stringify() always produces perl-parsable structures, so... · c5581fcc
  Leo Gordon authored 12 years ago
  c5581fcc
- cosmetic: added another short summary of Git commits to Changelog for CVS-only users · e83158ae
  Leo Gordon authored 12 years ago
  
  View commits for tag lg4_post_rel70_20121127 lg4_post_rel70_20121127
  
  e83158ae
Nov 23, 2012
- bugifx: create meadow_capacity limiters whether or not there is a limit · b03537a1
  Leo Gordon authored 12 years ago
  
  b03537a1
- added a new per-analysis "analysis_capacity" limiter for cases where users... · d68fe01b
  Leo Gordon authored 12 years ago
  d68fe01b
- switch the Scheduler to using universal Limiter objects (cleaner code, more... · 24bfdb58
  Leo Gordon authored 12 years ago
  24bfdb58
- moved pending adjustment out of the main scheduling subroutine, which... · 62bda079
  Leo Gordon authored 12 years ago
  62bda079
- Introduced a new 'NO_ROLE' cause_of_death for failures during specialization... · ade5f427
  Leo Gordon authored 12 years ago
  ade5f427
- bugfix: avoid specializing in an otherwise BLOCKED analysis that is... · 704ea8cc
  Leo Gordon authored 12 years ago
  704ea8cc
Nov 21, 2012
- (multi-meadow scheduler) restrict the set of analyses that a worker with a... · 96b3c6cd
  Leo Gordon authored 12 years ago
  96b3c6cd
- separated the Scheduler's code into a separate module (not an object yet) · 55de1985
  Leo Gordon authored 12 years ago
  
  55de1985
Nov 20, 2012
- Merge branch 'master' of git.internal.sanger.ac.uk:/repos/git/ensembl/compara/ensembl-hive · 49e581d2
  Matthieu Muffato authored 12 years ago
  
  49e581d2
- bugfix: if re-running a job that creates a semaphored group, we no longer die... · efacc250
  Leo Gordon authored 12 years ago
  efacc250
- Added API and schema support for analysis_base.meadow_type /... · 24019053
  Leo Gordon authored 12 years ago
  24019053
- proof of concept: all structures passed into calls and back are now meadow-aware · f1603685
  Leo Gordon authored 12 years ago
  
  f1603685
- pass complete valley-wide stats into schedule_workers without filtering · 7e2f06f6
  Leo Gordon authored 12 years ago
  
  7e2f06f6