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Commit 11a28d6c authored by Daniel Sobral's avatar Daniel Sobral
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Added a couple of biotypes to the list.

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......@@ -35,6 +35,7 @@ my %attrib_codes = ( 'miRNA' => 'miRNA',
'Mt_tRNA' => 'MTtRNA',
'Mt_rRNA' => 'MTrRNA',
'ncRNA' => 'ncRNA',
'polymorphic_pseudogene' => 'pseudo',
'havana_pseudogene' => 'pseudo',
'processed_pseudogene' => 'pseudo',
'unprocessed_pseudogene' => 'pseudo',
......@@ -52,11 +53,20 @@ my %attrib_codes = ( 'miRNA' => 'miRNA',
'IG_J_gene' => 'Ig',
'IG_D_gene' => 'Ig',
'IG_C_gene' => 'Ig',
'IG_Z_gene' => 'Ig',
'IG_M_gene' => 'Ig',
'TR_C_gene' => 'Ig', #Actually it is TR but was put with Igs (v62)
'TR_J_gene' => 'Ig', #Actually it is TR but was put with Igs (v62)
'TR_V_gene' => 'Ig', #Actually it is TR but was put with Igs (v62)
'C_segment' => 'Ig',
'D_segment' => 'Ig',
'J_segment' => 'Ig',
'V_segment' => 'Ig',
'IG_pseudogene' => 'pseudo',
'IG_V_pseudogene' => 'pseudo',
'IG_C_pseudogene' => 'pseudo',
'TR_V_pseudogene' => 'pseudo',
'IG_J_pseudogene' => 'pseudo',
'retrotransposed' => 'rettran',
'processed_transcript' => 'proc_tr',
'lincRNA' => 'lincRNA',);
......
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