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Commit 408622bd authored by Magali Ruffier's avatar Magali Ruffier
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correct analysis name

parent 8e4b069c
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...@@ -114,7 +114,7 @@ sub run_coordinatemapping { ...@@ -114,7 +114,7 @@ sub run_coordinatemapping {
my $analysis_sql = qq( my $analysis_sql = qq(
SELECT analysis_id SELECT analysis_id
FROM analysis FROM analysis
WHERE logic_name = 'xrefcoodinatemapping' WHERE logic_name = 'xrefcoordinatemapping'
AND parameters = ? AND parameters = ?
); );
...@@ -125,7 +125,7 @@ sub run_coordinatemapping { ...@@ -125,7 +125,7 @@ sub run_coordinatemapping {
if ( !defined($analysis_id) ) { if ( !defined($analysis_id) ) {
$analysis_id = $analysis_id =
$core_dbh->selectall_arrayref( "SELECT analysis_id FROM analysis " $core_dbh->selectall_arrayref( "SELECT analysis_id FROM analysis "
. "WHERE logic_name = 'xrefcoodinatemapping'" )->[0][0]; . "WHERE logic_name = 'xrefcoordinatemapping'" )->[0][0];
if ( defined($analysis_id) && $do_upload ) { if ( defined($analysis_id) && $do_upload ) {
log_progress( "Will update 'analysis' table " log_progress( "Will update 'analysis' table "
...@@ -145,7 +145,7 @@ sub run_coordinatemapping { ...@@ -145,7 +145,7 @@ sub run_coordinatemapping {
} else { } else {
log_progress("Can not find analysis ID for this analysis:\n"); log_progress("Can not find analysis ID for this analysis:\n");
log_progress(" logic_name = 'xrefcoodinatemapping'\n"); log_progress(" logic_name = 'xrefcoordinatemapping'\n");
log_progress( " parameters = '%s'\n", $analysis_params ); log_progress( " parameters = '%s'\n", $analysis_params );
if ($do_upload) { if ($do_upload) {
...@@ -163,7 +163,7 @@ sub run_coordinatemapping { ...@@ -163,7 +163,7 @@ sub run_coordinatemapping {
. 'VALUES(?, now(), ?, \N, \N, \N, ?, \N, \N, ?, ?, \N, \N, \N)'; . 'VALUES(?, now(), ?, \N, \N, \N, ?, \N, \N, ?, ?, \N, \N, \N)';
my $sth = $core_dbh->prepare($sql); my $sth = $core_dbh->prepare($sql);
$sth->execute( ++$analysis_id, 'xrefcoodinatemapping', $sth->execute( ++$analysis_id, 'xrefcoordinatemapping',
'xref_mapper.pl', $analysis_params, 'xref_mapper.pl', $analysis_params,
'CoordinateMapper.pm' ); 'CoordinateMapper.pm' );
} }
......
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