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ensembl-gh-mirror
ensembl
Commits
47a6f936
Commit
47a6f936
authored
13 years ago
by
Helder Pedro
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added mycosphaerella graminicola species
parent
c8855c9a
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1 changed file
misc-scripts/xref_mapping/xref_config.ini
+81
-4
81 additions, 4 deletions
misc-scripts/xref_mapping/xref_config.ini
with
81 additions
and
4 deletions
misc-scripts/xref_mapping/xref_config.ini
+
81
−
4
View file @
47a6f936
...
...
@@ -2860,6 +2860,17 @@ parser = EG_DBParser
release_uri
=
data_uri
=
script:host=>mysql-eg-pan-1,port=>4276,dbname=>EG_Xrefs,
[source ENA_GENE::MULTI]
# Used by aspergillus_niger
name
=
ENA_GENE
download
=
N
order
=
70
priority
=
1
prio_descr
=
parser
=
release_uri =
data_uri
=
[source CADRE::MULTI]
# Used by aspergillus_clavatus, aspergillus_flavus, aspergillus_fumigatus, aspergillus_nidulans, aspergillus_niger, aspergillus_oryzae, aspergillus_terreus, neosartorya_fischeri
name
=
CADRE
...
...
@@ -2926,6 +2937,39 @@ parser =
release_uri =
data_uri
=
[source BROAD_F_oxysporum::MULTI]
# Used by fusarium_oxysporum
name
=
BROAD_F_oxysporum
download
=
N
order
=
70
priority
=
1
prio_descr
=
parser
=
release_uri =
data_uri
=
[source BROAD_g_zeae::MULTI]
# Used by gibberella_zeae
name
=
BROAD_G_zeae
download
=
N
order
=
70
priority
=
1
prio_descr
=
parser
=
release_uri =
data_uri
=
[source BROAD_G_moniliformis::MULTI]
# Used by gibberella_moniliformis
name
=
BROAD_G_moniliformis
download
=
N
order
=
70
priority
=
1
prio_descr
=
parser
=
release_uri =
data_uri
=
[source wormpep_id::caenorhabditis_elegans]
# Used by caenorhabditis_elegans
name
=
wormpep_id
...
...
@@ -3276,9 +3320,8 @@ source = RefSeq_dna::MULTI-fungi
source
=
RefSeq_peptide::MULTI-fungi
source
=
Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
RFAM::MULTI
source
=
TRNASCAN_SE::MULTI
source
=
RNAMMER::MULTI
source
=
ncRNA::EG
source
=
misc_EG::EG
[species aspergillus_oryzae]
taxonomy_id
=
5062
...
...
@@ -3348,6 +3391,23 @@ source = ncRNA::EG
source
=
misc_EG::EG
source
=
PHIbase::MULTI
[species mycosphaerella_graminicola]
taxonomy_id
=
336722
taxonomy_id
=
54743
aliases
=
mycosphaerellagraminicola, mgraminicola, Mycosphaerella graminicola, Mycosphaerella graminicola IPO323
source
=
EntrezGene::MULTI
source
=
GO::MULTI
source
=
goslim_goa::EG
source
=
InterproGO::MULTI
source
=
Interpro::MULTI
source
=
RefSeq_dna::MULTI-fungi
source
=
RefSeq_peptide::MULTI-fungi
source
=
Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
ncRNA::EG
source
=
misc_EG::EG
source
=
PHIbase::MULTI
[species trichoplax_adhaerens]
taxonomy_id
=
10228
aliases
=
trichoplaxadhaerens, tadhaerens, Trichoplax adhaerens, Trichoplax adhaerens Grell-BS-1999
...
...
@@ -4491,6 +4551,7 @@ source = Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
PHIbase::MULTI
source
=
ncRNA::EG
source
=
misc_EG::EG
[species phytophthora_sojae]
taxonomy_id
=
67593
...
...
@@ -4506,6 +4567,7 @@ source = Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
PHIbase::MULTI
source
=
ncRNA::EG
source
=
misc_EG::EG
[species phytophthora_ramorum]
taxonomy_id
=
164328
...
...
@@ -4521,6 +4583,7 @@ source = Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
PHIbase::MULTI
source
=
ncRNA::EG
source
=
misc_EG::EG
[species nectria_haematococca]
taxonomy_id
=
140110
...
...
@@ -4538,7 +4601,6 @@ source = Uniprot/SWISSPROT::MULTI
source
=
PHIbase::MULTI
source
=
ncRNA::EG
[species fusarium_oxysporum]
taxonomy_id
=
426428
taxonomy_id
=
59765
...
...
@@ -4557,6 +4619,21 @@ source = PHIbase::MULTI
source
=
ncRNA::EG
source
=
misc_EG::EG
[species tuber_melanosporum]
taxonomy_id
=
656061
taxonomy_id
=
39416
aliases
=
source = EntrezGene::MULTI
source
=
GO::MULTI
source
=
goslim_goa::EG
source
=
InterproGO::MULTI
source
=
Interpro::MULTI
source
=
RefSeq_dna::MULTI-fungi
source
=
RefSeq_peptide::MULTI-fungi
source
=
Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
[species gibberella_zeae]
taxonomy_id
=
229533
taxonomy_id
=
5518
...
...
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