Skip to content
Snippets Groups Projects
Commit 5194744d authored by juguang's avatar juguang
Browse files

comment out the line to call attach_seq, for the method is no more in v26

parent c6cbd736
No related branches found
Tags cvs/release/ensemblgenomes/19-72
No related merge requests found
...@@ -96,10 +96,10 @@ sub _convert_single_to_alignFeature { ...@@ -96,10 +96,10 @@ sub _convert_single_to_alignFeature {
my $align_feature; my $align_feature;
if($program =~ /blastn/i){ if($program =~ /blastn/i){
$align_feature = new Bio::EnsEMBL::DnaDnaAlignFeature(@args); $align_feature = new Bio::EnsEMBL::DnaDnaAlignFeature(@args);
$align_feature->attach_seq($contig); # $align_feature->attach_seq($contig);
}elsif($program =~ /blastx/i){ }elsif($program =~ /blastx/i){
$align_feature = new Bio::EnsEMBL::DnaPepAlignFeature(@args); $align_feature = new Bio::EnsEMBL::DnaPepAlignFeature(@args);
$align_feature->attach_seq($contig); # $align_feature->attach_seq($contig);
}else{ }else{
$self->throw("\[$program\] is not supported yet"); $self->throw("\[$program\] is not supported yet");
} }
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment