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ensembl-gh-mirror
ensembl
Commits
5e4ae1de
Commit
5e4ae1de
authored
Aug 08, 2013
by
Magali Ruffier
Browse files
ENSCORESW-579
: checking new species for which UniGene data is available
added sources for chimp, cod and anolis
parent
79d0379c
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misc-scripts/xref_mapping/xref_config.ini
misc-scripts/xref_mapping/xref_config.ini
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misc-scripts/xref_mapping/xref_config.ini
View file @
5e4ae1de
...
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@@ -2354,6 +2354,18 @@ release_uri =
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Anopheles_gambiae/Aga.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Anopheles_gambiae/Aga.data.gz
[source UniGene::anolis_carolinensis]
# Used by anolis_carolinensis
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Anolis_carolinensis/Acr.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Anolis_carolinensis/Acr.data.gz
[source UniGene::apis_mellifera]
# Used by apis_mellifera
name
=
UniGene
...
...
@@ -2474,6 +2486,18 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Equus_caballus/Eca.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Equus_caballus/Eca.data.gz
[source UniGene::gadus_morhua]
# Used by gadus_morhua
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gadus_morhua/Gmr.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gadus_morhua/Gmr.data.gz
[source UniGene::gallus_gallus]
# Used by gallus_gallus
name
=
UniGene
...
...
@@ -2619,6 +2643,18 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Ornithorhynchus_anatinus/Oan.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Ornithorhynchus_anatinus/Oan.data.gz
[source UniGene::pan_troglodytes]
# Used by pan_troglodytes
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Pan_troglodytes/Ptr.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Pan_troglodytes/Ptr.data.gz
[source UniGene::petromyzon_marinus]
# Used by petromyzon_marinus
name
=
UniGene
...
...
@@ -4141,6 +4177,7 @@ source = InterproGO::MULTI
source
=
Interpro::MULTI
source
=
RefSeq_dna::MULTI-vertebrate_other
source
=
RefSeq_peptide::MULTI-vertebrate_other
source
=
UniGene::anolis_carolinensis
source
=
Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
Uniprot/SWISSPROT::DIRECT
...
...
@@ -5122,6 +5159,7 @@ source = InterproGO::MULTI
source
=
Interpro::MULTI
source
=
RefSeq_dna::MULTI-vertebrate_other
source
=
RefSeq_peptide::MULTI-vertebrate_other
source
=
UniGene::gadus_morhua
source
=
Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
Uniprot/SWISSPROT::DIRECT
...
...
@@ -5581,6 +5619,7 @@ source = InterproGO::MULTI
source
=
Interpro::MULTI
source
=
RefSeq_dna::pan_troglodytes
source
=
RefSeq_peptide::pan_troglodytes
source
=
UniGene::pan_troglodytes
source
=
Uniprot/SPTREMBL::MULTI
source
=
Uniprot/SWISSPROT::MULTI
source
=
Uniprot/SWISSPROT::DIRECT
...
...
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