; list of features that are indexed ready for searching
ENSEMBL_SEARCH_IDXS=[ Disease Domain EST External Family Gene MRNA Marker Peptide Protein SNP SangerProject Sequence Unigene ]
# Das - default DAS mapmaster for "uploadable DAS"
ENSEMBL_DAS_MAPMASTER_DSN=ensembl1834
# Biggest unit of mapping
ENSEMBL_BUM=Chromosome
# Display info
SPECIES_COMMON_NAME=Human
SPECIES_BIO_NAME=Homo sapiens
SPECIES_CODE=hs
GENERATE_HOME_PAGE=yes
CYTOVIEW_ENABLED=1
ENSEMBL_PREDICTION_TEXT_CORE=Genes were annotated by the Ensembl automatic analysis pipeline using either a GeneWise model from a human/vertebrate protein, a set of aligned human cDNAs followed by GenomeWise for ORF prediction or from Genscan exons supported by protein, cDNA and EST evidence. GeneWise models are further combined with available aligned cDNAs to annotate UTRs.
ENSEMBL_PREDICTION_TEXT_PSEUDOGENE=Potential processed pseudogenes are detected from genewise predictions that have a single-exon with frameshifts, have their evidence spliced elsewhere in the genome and have no match in the syntenic genomic region in mouse.
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@@ -56,13 +48,7 @@ ENSEMBL_PREDICTION_TEXT_VEGA = Finished genomic sequence is analysed on a clone
[databases]
ENSEMBL_DB=homo_sapiens_core_19_34b
ENSEMBL_DISEASE=homo_sapiens_disease_19_34b
ENSEMBL_EST=homo_sapiens_est_19_34b
ENSEMBL_ESTGENE=homo_sapiens_estgene_19_34b
ENSEMBL_HAPLOTYPE=homo_sapiens_haplotype_19_34b
ENSEMBL_LITE=homo_sapiens_lite_19_34b
ENSEMBL_VEGA=homo_sapiens_vega_19_34b
ENSEMBL_SNP=homo_sapiens_snp_19_34b
# The following are extra configuration parameters for the databases
# You can overide the default settings for specific databases. Just add a
