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Commit b42efe16 authored by Glenn Proctor's avatar Glenn Proctor
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Skip genes that are listed in Compara but aren't in the relevant core...

Skip genes that are listed in Compara but aren't in the relevant core databases. Shouldn't be necessary in production runs but makes testing with previous Compara versions easier.
parent c158ecbc
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......@@ -188,12 +188,16 @@ foreach my $to_species (@to_multi) {
my $from_gene = $from_ga->fetch_by_stable_id($from_stable_id);
next if (!$from_gene);
my @to_genes = @{$homologies->{$from_stable_id}};
my $i = 1;
foreach my $to_stable_id (@to_genes) {
my $to_gene = $to_ga->fetch_by_stable_id($to_stable_id);
next if (!$to_gene);
project_display_names($to_ga, $to_dbea, $from_gene, $to_gene, $i, scalar(@to_genes), %db_to_type) if ($names);
project_go_terms($to_ga, $to_dbea, $ma, $from_gene, $to_gene) if ($go_terms);
......
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