Commit e3734666 authored by Ian Longden's avatar Ian Longden
Browse files

gapped alignment at 100 percent

parent 1094a4e9
package XrefMapper::Methods::ExonerateGappedBest_100_perc_id;
use XrefMapper::Methods::ExonerateBasic;
use vars '@ISA';
@ISA = qw{XrefMapper::Methods::ExonerateBasic};
sub options {
return ('--gappedextension FALSE', '--model', 'affine:local', '--subopt', 'no', '--bestn', '1');
sub query_identity_threshold {
return 100;
sub target_identity_threshold {
return 100;
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