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modules/Bio/EnsEMBL/IdMapping/ResultAnalyser.pm

@@ -733,34 +733,28 @@ sub create_summary_email {
 
   print $fh "\n";
 
-  # EG genes_lost.txt file may not exist if species is new
-  if ( $self->file_exists( 'genes_lost.txt', 'debug' ) ) {
-
-    #
-    # clicklist of first 10 deleted genes
-    #
-    print $fh qq(\nFirst 10 deleted known genes:\n);
-    print $fh qq(=============================\n\n);
-
-    my $in_fh = $self->get_filehandle( 'genes_lost.txt', 'debug', '<' );
-    my $prefix = $self->conf->param('urlprefix');
-    my $i;
-
-    while (<$in_fh>) {
-      last if ( ++$i > 10 );
+  #
+  # clicklist of first 10 deleted genes
+  #
+  print $fh qq(\nFirst 10 deleted known genes:\n);
+  print $fh qq(=============================\n\n);
 
-      chomp;
-      my ( $stable_id, $type ) = split(/\s+/);
+  my $in_fh = $self->get_filehandle( 'genes_lost.txt', 'debug', '<' );
+  my $prefix = $self->conf->param('urlprefix');
+  my $i;
 
-      next unless ( $type eq 'known' );
+  while (<$in_fh>) {
+    last if ( ++$i > 10 );
 
-      print $fh sprintf( $fmt2, $stable_id, "${prefix}$stable_id" );
-    }
+    chomp;
+    my ( $stable_id, $type ) = split(/\s+/);
 
-    close($in_fh);
+    next unless ( $type eq 'known' );
 
-  } ## end if ( $self->file_exists...)
+    print $fh sprintf( $fmt2, $stable_id, "${prefix}$stable_id" );
+  }
 
+  close($in_fh);
   close($fh);
 }