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- Oct 28, 2011
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Andy Yates authored
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- Oct 17, 2011
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Ian Longden authored
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- Oct 12, 2011
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Monika Komorowska authored
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- Oct 05, 2011
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Ian Longden authored
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- Sep 29, 2011
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Ian Longden authored
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- Sep 27, 2011
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Andy Yates authored
Merging of UniParc mapping code into the Xref system. This relies on being able to contact the EBI based UniParc readonly database.
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- Sep 07, 2011
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Ian Longden authored
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- Sep 05, 2011
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Ian Longden authored
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- Jul 29, 2011
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Monika Komorowska authored
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- Jun 28, 2011
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Arnaud Kerhornou authored
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- May 24, 2011
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Ian Longden authored
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- May 13, 2011
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Ian Longden authored
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- May 11, 2011
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Monika Komorowska authored
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- May 05, 2011
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Ian Longden authored
make sure each transcript even if it is in a differernt gene have differernt transcript ext for the same gene name
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- May 04, 2011
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Ian Longden authored
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- May 03, 2011
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Monika Komorowska authored
used to process the mappings if species.pm file is not found.
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- Apr 15, 2011
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Ian Longden authored
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- Apr 11, 2011
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Ian Longden authored
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- Mar 04, 2011
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Ian Longden authored
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- Dec 13, 2010
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Ian Longden authored
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- Sep 15, 2010
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Ian Longden authored
MGI have added -ps to psuedo gene names but havana have not doen this yet so check for this when getting descriptions etc
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- Mar 25, 2010
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Ian Longden authored
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- Mar 22, 2010
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Ian Longden authored
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- Feb 12, 2010
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Ian Longden authored
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- Jan 28, 2010
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Ian Longden authored
For offical naming take the gene name of the most comman transcript name. Also remove any version numbers from the transcripts
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- Dec 17, 2009
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Ian Longden authored
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- Dec 02, 2009
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Ian Longden authored
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- Nov 06, 2009
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Ian Longden authored
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- Sep 29, 2009
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Ian Longden authored
if no xref database is specified in the config file then do not try to connect to it. Needed for -recalc_display_xrefs option
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- Sep 14, 2009
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Ian Longden authored
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- Sep 02, 2009
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Ian Longden authored
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- Sep 01, 2009
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Ian Longden authored
use priority level as well as the list. Things like MGI and HGNC can come form many places so make sure you get the best one
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- Aug 13, 2009
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Ian Longden authored
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- Jul 21, 2009
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Ian Longden authored
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- Jun 05, 2009
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Ian Longden authored
added master_xref_id to object_xrefs to fix problems with only one entry in the dependent_xref table. Also new routines added to reset the database to specific points in the xref process
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- Jun 01, 2009
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Ian Longden authored
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- May 22, 2009
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Ian Longden authored
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- Mar 31, 2009
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Ian Longden authored
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- Mar 18, 2009
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Ian Longden authored
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- Mar 17, 2009
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Ian Longden authored
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