Commits · 4742ea178bb5a4d238d7952ffc8be455c5a718bc · ensembl-gh-mirror / ensembl

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Jul 05, 2007
- Added API support and regression testing for go_xref.source_xref_id data · 4742ea17
  Will Spooner authored 18 years ago
  
  4742ea17
- Updates due to go_xref schema change · f2c64123
  Will Spooner authored 18 years ago
  
  f2c64123
- 45->46 · 1f760285
  Ian Longden authored 18 years ago
  
  1f760285
- Added go_xref.source_xref_id field · 9adffa52
  Will Spooner authored 18 years ago
  
  9adffa52
Jul 04, 2007
- Added config for chimp · 911b23c2
  Julio Fernandez Banet authored 18 years ago
  
  911b23c2
- Added EMBL and protein_id sources: · a44986c7
  Bronwen Aken authored 18 years ago
  a44986c7
Jul 03, 2007
- removed RGD from accession name, just use the number from now on · f78b38e8
  Ian Longden authored 18 years ago
  
  f78b38e8
- change to subroutine transcript_display+xref_sources so that it now return the... · 83ca0284
  Ian Longden authored 18 years ago
  83ca0284
- new column linkage_annotation added to object_xref · ff8c5afe
  Ian Longden authored 18 years ago
  
  ff8c5afe
Jul 02, 2007
- Updated with patches to v 46 (more to come) · c5bd32c9
  Glenn Proctor authored 18 years ago
  
  c5bd32c9
- Add unique key to meta_key/meta_value columns in meta table. · 73fbdd32
  Glenn Proctor authored 18 years ago
  
  73fbdd32
- Make external_db column in unmapped_object be SMALLINT UNSIGNED explicitly. · 7f474b79
  Glenn Proctor authored 18 years ago
  
  7f474b79
- Change version to 46 · 18e80631
  Glenn Proctor authored 18 years ago
  
  18e80631
- Changed version to 46. · b819d6c9
  Glenn Proctor authored 18 years ago
  
  b819d6c9
- Changed schema version to 46. · 9f921817
  Glenn Proctor authored 18 years ago
  
  9f921817
Jun 29, 2007
- adaptations due to changes in Logger · d44a3f18
  Patrick Meidl authored 18 years ago
  
  d44a3f18
- introduced loglevels · 7511fdd8
  Patrick Meidl authored 18 years ago
  
  7511fdd8
- considerable rewrite to make it easier to use · 340a6b9f
  Patrick Meidl authored 18 years ago
  
  340a6b9f
- latest state of the code (bugfixes and adaptations due to changes in ConfParser and Logger) · 4603dc5b
  Patrick Meidl authored 18 years ago
  
  4603dc5b
- latest state of the code (mostly adaptations due to changes in ConfParser and Logger) · 649a4c36
  Patrick Meidl authored 18 years ago
  
  649a4c36
- Don't project if a GO term with the same accession, but IEA evidence code,... · 8396a261
  Glenn Proctor authored 18 years ago
  8396a261
Jun 28, 2007
- added argument in seq method to return sequence with coverage information if set to 1 · a959ef85
  Daniel Rios authored 18 years ago
  
  a959ef85
Jun 27, 2007
- changed status of some methods from 'At Risk' to 'Stable' · f8f6451e
  Patrick Meidl authored 18 years ago
  
  f8f6451e
Jun 26, 2007
- script to evaluate Status of API methods · 68d7f364
  Patrick Meidl authored 18 years ago
  
  68d7f364
Jun 25, 2007
- Add a couple of missing $sth->finish · dea8c9cf
  Javier Herrero authored 18 years ago
  
  dea8c9cf
- Add a missing $sth->finish · fba578b2
  Javier Herrero authored 18 years ago
  
  fba578b2
Jun 21, 2007
- Added new optional argument $external_db_name to · ac52bc8e
  Andreas Kusalananda Kähäri authored 18 years ago
  ac52bc8e
Jun 20, 2007
- ficex Go to use ALL tax ids for a particular species (anonpholese fix but... · 0c8cf5bc
  Ian Longden authored 18 years ago
  0c8cf5bc
- Remove the '-skipdownload' switch. · 33171ae1
  Andreas Kusalananda Kähäri authored 18 years ago
  33171ae1
- Enable all homology types · c6ba88eb
  Glenn Proctor authored 18 years ago
  
  c6ba88eb
- *** empty log message *** · 27ea8523
  Glenn Proctor authored 18 years ago
  
  27ea8523
- Added human-fish (one to many mode) · 315abe0c
  Glenn Proctor authored 18 years ago
  
  315abe0c
- Added ability to project (apparent)one2many orthologs as well. Multiple... · 52181cbf
  Glenn Proctor authored 18 years ago
  52181cbf
- Fix GOA release file parsing. · 173b9a88
  Andreas Kusalananda Kähäri authored 18 years ago
  
  173b9a88
Jun 18, 2007
- More informative error message. · 0b93fc86
  Glenn Proctor authored 18 years ago
  
  0b93fc86
- require requires a bareword but we have a scalar, so use eval. · 88025497
  Andreas Kusalananda Kähäri authored 18 years ago
  
  88025497
- method file for anopheles gambiae · 93c1ca09
  Ian Longden authored 18 years ago
  
  93c1ca09
- A tiny but essential piece of code was missing... · 6ce7d42e
  Andreas Kusalananda Kähäri authored 18 years ago
  
  6ce7d42e
Jun 15, 2007
- Added Multiple Assembled attribute · e01353ff
  Ian Longden authored 18 years ago
  
  e01353ff
- reinstate call to cahce_seq_ids_with_mult_assemblys as this has now been fixed · 3f875976
  Ian Longden authored 18 years ago
  
  3f875976