removing copy from ensembl-core

new version now in ensembl-production

removing ensembl-core copy

removing ensembl-core version

remove old versions from ensembl-core checkout

removing ensembl-core copies

removing ensembl-core versions

removing ensembl-core copy

retiring ensembl-core version

removed species-specific configuration file which do not have anything different from the main mapper

Uniprot_genename replaced with Uniprot_gn
_transcript_name suffix replaced with _trans_name suffix

_transcript_name suffix replaced with _trans_name suffix
Uniprot_genename source replaced with Uniprot_gn

gene names can be duplicated, so use of a insert ignore when adding the corresponding transcript name

do not attempt to ref object as it could be its id

for each object, methods are explicitly defined

[ENSCORESW-499]. schemaPatches.t checks that the table.sql patch set matches what is in the patched database

there should not be any, and we end up adding data which is not an ontology

miscellaneous section removed
removed hard coded html tags for schema file, this is now at the top of the file
merged two description tags for interpro table, was only using the second one