Commits · 59951a73d4a308fd18242ab8a05b0aac1bfcf5f1 · ensembl-gh-mirror / ensembl

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Feb 07, 2017
- ENSCORESW-1731 : remove mislinked synonyms · 59951a73
  Magali Ruffier authored 8 years ago
  
  59951a73
- add new staging port, not 3306 any more · 6773339c
  Magali Ruffier authored 8 years ago
  
  6773339c
- Merge branch 'master' of https://github.com/Ensembl/ensembl · 1d2458fa
  Magali Ruffier authored 8 years ago
  
  1d2458fa
- add port, defaults to staging one · 580643d7
  Magali Ruffier authored 8 years ago
  
  580643d7
- ignore some dodgy transcript names · 1031368f
  Magali Ruffier authored 8 years ago
  
  1031368f
- ENSCORESW-369 : checksum the checksum correctly · 04f19024
  Magali Ruffier authored 8 years ago
  
  04f19024
Feb 01, 2017
- Merge pull request #181 from epaule/master · 6a1a2678
  Alessandro Vullo authored 8 years ago
```
Protein Feature patch
```
  6a1a2678
- Merge pull request #179 from waakanni/master · 9c3a7249
  Magali Ruffier authored 8 years ago
```
added a statement to query the family table for rest family endpoint,…
```
  9c3a7249
Jan 31, 2017
- wrong bioperl version · 96032700
  Magali Ruffier authored 8 years ago
  
  96032700
- ignore EPD source · 94e21904
  Magali Ruffier authored 8 years ago
  
  94e21904
- use correct md5 method · da996b25
  Magali Ruffier authored 8 years ago
  
  da996b25
Jan 30, 2017
- Merge branch 'master' of https://github.com/Ensembl/ensembl · fc057ecb
  premanand17 authored 8 years ago
  
  fc057ecb
- Replaced the script with updated version that works for both ensembl and... · 5f38f835
  premanand17 authored 8 years ago
```
Replaced the script with updated version that works for both ensembl and ensemblgenomes - ENSCORESW-1849
```
  5f38f835
- Updated regex to be more lenient to accomodate different patch name formats - ENSCORESW-2099 · edd23fe0
  premanand17 authored 8 years ago
  
  edd23fe0
- added the patch data to the meta table · bd37edb6
  elpaule authored 8 years ago
  
  bd37edb6
- that is the output from the patch_test_databases.pl · c09b1a0a
  elpaule authored 8 years ago
  
  c09b1a0a
Jan 27, 2017
- * removed cases that can't happen based on Kierons comments · 5e8aac7c
  elpaule authored 8 years ago
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* removed a dubious sql patch commit
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  5e8aac7c
- updated the Apache License · ee212bd0
  elpaule authored 8 years ago
  
  ee212bd0
- incremental patch for protein feature uniqueness · c36f062f
  elpaule authored 8 years ago
  
  c36f062f
- change protein feature uniqueness to be pe analysis · 5cab112a
  elpaule authored 8 years ago
  
  5cab112a
- and revert, I was just joking · 39fbd676
  Magali Ruffier authored 8 years ago
  
  39fbd676
- test newer perls with newer bioperl · 4c3f7cd9
  Magali Ruffier authored 8 years ago
  
  4c3f7cd9
Jan 26, 2017
- added the previous empty lines · cfdadc00
  Wasiu Akanni authored 8 years ago
  
  cfdadc00
- forget about newer perl for the moment · 544e8654
  Magali Ruffier authored 8 years ago
  
  544e8654
- Merge pull request #178 from muffato/testdb_patch · 0883dad0
  Magali Ruffier authored 8 years ago
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All test-databases patched to e88
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  0883dad0
- trying some newer perl versions · f88fd60b
  Magali Ruffier authored 8 years ago
  
  f88fd60b
Jan 25, 2017
- added a statement to query the family table for rest family endpoint, also fixed a bug · 0e83deac
  Wasiu Akanni authored 8 years ago
  
  0e83deac
Jan 24, 2017
- Patched the Compara test-databases · f182365f
  Matthieu Muffato authored 8 years ago
  
  f182365f
- Patched the Variation test-databases · ca892b40
  Matthieu Muffato authored 8 years ago
  
  ca892b40
- Patched the Core test-databases · 145b2140
  Matthieu Muffato authored 8 years ago
  
  145b2140
Jan 18, 2017
- Merge pull request #177 from willmclaren/patch-1 · 7b10d322
  Magali Ruffier authored 8 years ago
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Use proper arrayref address
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  7b10d322
- Use proper arrayref address · 82affd0c
  William McLaren authored 8 years ago
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(@array_of_arrayrefs)[0][0] breaks in perl 5.8
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  82affd0c
- [ENSCORESW-2123 ]. Transfer logic to feature adaptor. · 5b20e766
  Alessandro Vullo authored 8 years ago
  
  5b20e766
Jan 17, 2017
- [ENSCORESW-2091 ]. Test fetching feature seq_region_(start|end) directly from DB. · 2db9f0b5
  Alessandro Vullo authored 8 years ago
  
  2db9f0b5
- A more resilient approach to look up the feature table from the feature class · 6c436f6a
  Alessandro Vullo authored 8 years ago
```
which is not forcing us to add core API alien entries (e.g. VariationFeature)
in the look up table.
```
  6c436f6a
- Merge pull request #176 from thomasmaurel/annual_copyright_updater · 704e7dfb
  Magali Ruffier authored 8 years ago
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Made the assumption that all the EBI copyright would start by 2016 bu…
```
  704e7dfb
- Made the assumption that all the EBI copyright would start by 2016 but it's... · d7f8813c
  Thomas Maurel authored 8 years ago
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Made the assumption that all the EBI copyright would start by 2016 but it's not the case for the Ensembl genomes repos. Now updated regex to be more generic
```
  d7f8813c
- ignore CLEAN files · fa69e5e6
  Magali Ruffier authored 8 years ago
  
  fa69e5e6
- add missing licences · bb44bda7
  Magali Ruffier authored 8 years ago
  
  bb44bda7
- update copyright for 2017 · edf4c4d1
  Magali Ruffier authored 8 years ago
  
  edf4c4d1