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- Jan 21, 2013
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Kieron Taylor authored
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Kieron Taylor authored
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- Jan 17, 2013
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Magali Ruffier authored
fix sent by mg13
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- Jan 09, 2013
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Magali Ruffier authored
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Magali Ruffier authored
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Magali Ruffier authored
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- Jan 07, 2013
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Andy Yates authored
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Andy Yates authored
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- Dec 21, 2012
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Andy Yates authored
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- Dec 17, 2012
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Andy Yates authored
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- Dec 14, 2012
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Andy Yates authored
Adding a no_error flag to allow for simple single value querying where the number of rows returned could be ambigious
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- Dec 13, 2012
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Andy Yates authored
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Andy Yates authored
Go through an object and make sure everything is populated once we go through a call of $gene->load().
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- Dec 12, 2012
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Andy Yates authored
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- Dec 06, 2012
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Andy Yates authored
Counting features over HAPs/Patches/PARs was not working. Fixed by adding a SQL based filtering stage. The normal code will not use this as it is quite nasty
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- Dec 04, 2012
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
[ENSCORESW-314]. Synonym lookup bug fixed. Passed coord system id into the lookup rather than the actual coord system name. Bad bad bad
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Andy Yates authored
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- Nov 29, 2012
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Andy Yates authored
Ordering only by the session's created date failed to realise we could have more than one entry for the same stable id. Ordering now by the score as a way of getting rid of this ambiguity. Issue was picked up by Rhoda running the code on an older MySQL version which consistently exhibited different behaviour to later MySQL versions
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Andy Yates authored
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- Nov 07, 2012
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Andy Yates authored
Switched to Test::More and done_testing(). This should stop tests from failing due to poor test count specification.
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- Nov 06, 2012
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Andy Yates authored
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- Nov 05, 2012
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Andy Yates authored
Test schema now matches live. Any future patching should be done using the ensembl-test/scripts/patch_test_databases.pl script.
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Andy Yates authored
use Test::More rather than old Test library. Avoids breaking tests when we change the numbers of tests run
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Dan Staines authored
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Dan Staines authored
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Dan Staines authored
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Dan Staines authored
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Dan Staines authored
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- Nov 02, 2012
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Andy Yates authored
[ENSCORESW-302]. TranslationAdaptor did not deal with multispecies databases properly when querying for IDs.
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- Oct 31, 2012
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Andy Yates authored
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- Oct 26, 2012
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Andy Yates authored
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- Oct 08, 2012
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Kieron Taylor authored
Added a no_cache override feature plus testcase. Useful in times of memory crisis coupled with annoyingly slow lookups of small data.
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Andy Yates authored
[ENSCORESW-271]. Fixed the test being too chatty during cleanup by setting the RUNTESTS_HARNESS_NORESTORE before firing off a thread
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- Sep 28, 2012
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Andy Yates authored
[ENSCORESW-264] Can now handle odd sequence region names involving . - _ now. The supercontig names seemed to be a good source of these
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- Sep 27, 2012
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Simon Brent authored
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- Sep 25, 2012
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Andy Yates authored
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- Aug 16, 2012
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Andy Yates authored
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- Aug 15, 2012
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Andy Yates authored
Making sure multiple includes of the registry does not result in major issues with error detection (earlier work suggested a possible issue with this)
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