Commits · 66443ee71d1d726edae9aeb479f8ae31777f5da5 · ensembl-gh-mirror / ensembl

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May 01, 2003
- Speed improvement on Gene fetching · 66443ee7
  Arne Stabenau authored 21 years ago
  
  66443ee7
- unused · d6b5b866
  Simon Potter authored 21 years ago
  
  d6b5b866
- made ecs2 aware · 3e5b49ab
  Simon Potter authored 21 years ago
```
added -r cluster option
```
  3e5b49ab
- old · 3010012a
  Simon Potter authored 21 years ago
  
  3010012a
Apr 30, 2003
- added tables stable_id_event and mapping_session · ada95c1d
  Graham McVicker authored 21 years ago
  
  ada95c1d
- removed contig_start from some indices · b3a80e46
  Simon Potter authored 21 years ago
  
  b3a80e46
Apr 28, 2003
- fixed annoying mixed-case bug in _rearrange method · 0671cbaf
  Graham McVicker authored 21 years ago
  
  0671cbaf
Apr 25, 2003
- blast stuff · a24c4e4e
  Web Admin authored 21 years ago
  
  a24c4e4e
- add default values to ctg2geneomic · 440b68cb
  Brian Gibbins authored 21 years ago
  
  440b68cb
- Loaded the EnsemblHSP module · 360d2b62
  Will Spooner authored 21 years ago
  
  360d2b62
- Forgot to udpate latest version · 518b3102
  Emmanuel Mongin authored 21 years ago
  
  518b3102
Apr 24, 2003
- Fixed num bound params · 4037f33a
  Will Spooner authored 21 years ago
  
  4037f33a
- removed debugging cruft · 1e006850
  James Gilbert authored 21 years ago
  
  1e006850
- Do not set $transcript->_translation_id($translation_id) if $translation_id == 0 · 8690e8dc
  James Gilbert authored 21 years ago
  
  8690e8dc
- minor fix to hide method · 87b54125
  Graham McVicker authored 21 years ago
  
  87b54125
- Now ISA BaseAdaptor · 40f488d5
  Will Spooner authored 21 years ago
  
  40f488d5
- pod fix and commented out unimplemented method · 275edf76
  James Gilbert authored 21 years ago
  
  275edf76
- · 66f6f1a5
  Laura Clarke authored 21 years ago
```
test for new fetch_all_names method
```
  66f6f1a5
- · 5aad7dd8
  Laura Clarke authored 21 years ago
```
added a fetch_all_names method
```
  5aad7dd8
- updated Das to return stylesheet as well as data · 64432a87
  Web Admin authored 21 years ago
  
  64432a87
- Added External::BlastAdaptor support · 02250d17
  Will Spooner authored 21 years ago
  
  02250d17
- Module to retrieve blast features serialised in a database · 9f0632ef
  Will Spooner authored 21 years ago
  
  9f0632ef
Apr 23, 2003
- get_all_Genes_by_type should take optional logic_name, empty_flag arguments · 3de417e5
  Graham McVicker authored 21 years ago
  
  3de417e5
Apr 22, 2003
- fix bug related to fetching QTL features by slice · a8c975b5
  Graham McVicker authored 21 years ago
  
  a8c975b5
- added type PSEUDO to external_db status enum · e03889b5
  Graham McVicker authored 21 years ago
  
  e03889b5
- added wormbase_pseudogene to external_db table · 58f897a5
  Graham McVicker authored 21 years ago
  
  58f897a5
Apr 17, 2003
- removed some crufty test methods · 3e1716ad
  Graham McVicker authored 21 years ago
  
  3e1716ad
- DBEntryAdaptor::store changed so can no longer add external_db entries and refactored a bit · 69bacbf3
  Graham McVicker authored 21 years ago
  
  69bacbf3
- flush transcript before transform · 38b174bd
  Brian Gibbins authored 21 years ago
  
  38b174bd
Apr 16, 2003
- added new external_dbs · fc8cbda6
  Graham McVicker authored 22 years ago
  
  fc8cbda6
- removed insert_external_dbs.sql, update_external_dbs.pl script is replacement · bd21a9f8
  Graham McVicker authored 22 years ago
  
  bd21a9f8
Apr 15, 2003
- script for propogating external_db changes to all core databases · 51e3f849
  Graham McVicker authored 22 years ago
  
  51e3f849
- removed crufty scripts · 60c66623
  Graham McVicker authored 22 years ago
  
  60c66623
Apr 14, 2003
- · d5397a3c
  Laura Clarke authored 22 years ago
```
code encorporated into maps2db.pl
```
  d5397a3c
- updated for changed qtl schema, and altered feature creation criteria · 62a46912
  Graham McVicker authored 22 years ago
  
  62a46912
- *** empty log message *** · 32d5b69c
  Laura Clarke authored 22 years ago
  
  32d5b69c
- updated POD for display_xref methods, removed species methods · 2f47cd46
  Graham McVicker authored 22 years ago
  
  2f47cd46
- removed tests for species methods · 487d244b
  Graham McVicker authored 22 years ago
  
  487d244b
- whitespace change · 9acb2f1e
  Colin Kingswood authored 22 years ago
  
  9acb2f1e
Apr 11, 2003
- update for dumps · 0cc76bab
  Web Admin authored 22 years ago
  
  0cc76bab