Commits · 94922226503a16719c865bc09e62684f82a8f9d2 · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring failed 2 months ago.
Repository mirroring has been paused due to too many failed attempts. It can be resumed by a project maintainer or owner.
Last successful update 6 months ago.

May 16, 2005
- wrong function name spelling in test, was never run? · 94922226
  Arne Stabenau authored 19 years ago
  
  94922226
Apr 29, 2005

Added get_all_homologous_Genes to Bio::EnsEMBL::Gene that returns the... · c10d0eaa

Will Spooner authored 19 years ago

Added get_all_homologous_Genes to Bio::EnsEMBL::Gene that returns the Bio::EnsEMBL::Gene and Bio::EnsEMBL::Compara::Homology objects for each corresponding homologous gene in the Compara DB. Changed EnsEMBL::Web::Data::Gene to use this call with the benefit that the Compara DB gets hit obce only per GeneView request

c10d0eaa

Apr 18, 2005
- gene_description table testing removed, table doesnt exist any more · 3f599e6b
  Arne Stabenau authored 19 years ago
  
  3f599e6b
Apr 12, 2005
- Modifed regulatory feature tests for fetch_all -> get_all · 02a80c53
  Glenn Proctor authored 19 years ago
  
  02a80c53
Mar 24, 2005
- Added test for fetch_all_regulatory_features() · b589d3d2
  Glenn Proctor authored 20 years ago
  
  b589d3d2
Jan 20, 2005
- corrected test number · 8f616724
  Arne Stabenau authored 20 years ago
  
  8f616724
Dec 09, 2004
- basic read suport tests for created_date and modified_date · cc79c932
  Arne Stabenau authored 20 years ago
  
  cc79c932
- fetch_by_display_label tested · 420b3096
  Arne Stabenau authored 20 years ago
  
  420b3096
Jul 30, 2004
- DBAdaptor method db renamed dbc to stop confusion so all references to this have been changed · c8fcd6c2
  Ian Longden authored 20 years ago
  
  c8fcd6c2
Jul 29, 2004
- removed debug messages · 078b034c
  Ian Longden authored 20 years ago
  
  078b034c
- changes for registry mainly due to the fact that DBAdaptor no longer inherits from DBConnection · 5ae7d3c3
  Ian Longden authored 20 years ago
  
  5ae7d3c3
Jul 23, 2004
- updated tests to use centralised ensembl-test framework · 9cc34eb7
  Graham McVicker authored 20 years ago
  
  9cc34eb7
Jun 23, 2004
- added test to make sure gene display_xref_id was being set by store method · c605b882
  Graham McVicker authored 20 years ago
  
  c605b882
Apr 06, 2004
- save state of align feature tables before testing remove method · cdd9ca8d
  Graham McVicker authored 20 years ago
  
  cdd9ca8d
Mar 19, 2004
- more tests for remove methods for genes, transcripts, exons, translations etc. · 910024d0
  Graham McVicker authored 21 years ago
  
  910024d0
Mar 18, 2004
- added remove test, doesnt check all the removals jet, · d61de6cc
  Arne Stabenau authored 21 years ago
```
just gene, transcript, and exon table;
```
  d61de6cc
Mar 16, 2004
- added regression test: gene end was not always correctly set by recalculate coordinates · 481d2872
  Graham McVicker authored 21 years ago
  
  481d2872
Feb 11, 2004
- updated tests for new toplevel implementation · 21329512
  Graham McVicker authored 21 years ago
  
  21329512
Jan 09, 2004
- Merged in the new-seqstore into HEAD version · fc6ced68
  Arne Stabenau authored 21 years ago
  
  fc6ced68
Sep 29, 2003
- added test for gene description storing · 0229cfcd
  Graham McVicker authored 21 years ago
  
  0229cfcd
Jul 16, 2003
- Modified to reflect name change of list_stable_ids method. · 887a6b6e
  Glenn Proctor authored 21 years ago
  
  887a6b6e
- Added tests for list_dbIDs and list_stable_dbIDs. · 590d9a35
  Glenn Proctor authored 21 years ago
  
  590d9a35
Apr 14, 2003
- removed tests for species methods · 487d244b
  Graham McVicker authored 21 years ago
  
  487d244b
Mar 21, 2003
- cleaned up test a tiny bit · d7906d75
  Graham McVicker authored 22 years ago
  
  d7906d75
Feb 21, 2003
- update gene tests · 58f36f55
  Graham McVicker authored 22 years ago
  
  58f36f55
Jan 22, 2003

changed the way display_xref works in Gene and Transcript. Now takes DBEntry... · dd000af2

Arne Stabenau authored 22 years ago

changed the way display_xref works in Gene and Transcript. Now takes DBEntry object as argument. Is lazy loaded on request, if its not set before.

dd000af2

Jan 14, 2003
- updated dbConnection test, removed warning call from gene test · 5b5a84b9
  Graham McVicker authored 22 years ago
  
  5b5a84b9
Jan 02, 2003
- Tests for new update method. · 373aec50
  Alistair Rust authored 22 years ago
  
  373aec50
Dec 18, 2002
- relevant_xref_id -> display_xref_id · 5986c48c
  Alistair Rust authored 22 years ago
  
  5986c48c
Dec 17, 2002
- More tests. · 107176ff
  Alistair Rust authored 22 years ago
  
  107176ff
- Updated tests for external_name and external_db. · 3e54e077
  Alistair Rust authored 22 years ago
  
  3e54e077
- Removed tests for external name and external db. · 3be9d8bc
  Alistair Rust authored 22 years ago
  
  3be9d8bc
Nov 27, 2002
- lite store tested, but only if lite schema in test_genome · 18fda5f2
  Arne Stabenau authored 22 years ago
  
  18fda5f2
Nov 26, 2002
- Re-jigging of external_db and external_name tests. · a1aec194
  Alistair Rust authored 22 years ago
  
  a1aec194
Nov 25, 2002
- added species test · 71c57a41
  Arne Stabenau authored 22 years ago
  
  71c57a41
Nov 21, 2002
- added supporting feature test · bc3074db
  Arne Stabenau authored 22 years ago
  
  bc3074db
Nov 20, 2002
- some comments · ddf4d985
  Arne Stabenau authored 22 years ago
  
  ddf4d985
Nov 19, 2002
- removed warning in gene test script · 828cb84e
  Graham McVicker authored 22 years ago
  
  828cb84e
- all genes were known bug fixed · 351f862a
  Arne Stabenau authored 22 years ago
  
  351f862a
Nov 18, 2002
- added use of 'strict' and 'warnings' pragmas to some tests · 64d2539f
  Graham McVicker authored 22 years ago
  
  64d2539f