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- Nov 16, 2012
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Magali Ruffier authored
when looping, if looking for previous_dbname, would always be defined because of the last loop, so comparing the wrong databases
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Magali Ruffier authored
default value is core, so running without specifying anything will be as before
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- Oct 29, 2012
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Magali Ruffier authored
when the script is run, adds new entries for each seq_region id which has changed between current and previous release but also updated existing entries so that all rows internal_seq_region_id in seq_region_mapping correspond to a seq_region_id which is in the current database
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- Aug 30, 2012
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Magali Ruffier authored
also supports trinomial species names
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- Aug 21, 2012
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Magali Ruffier authored
for coord_system, check rank and name
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Magali Ruffier authored
methods are cleaner added length check to decide if it is the same region
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- Aug 17, 2012
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Magali Ruffier authored
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Magali Ruffier authored
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- Aug 15, 2012
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Magali Ruffier authored
password is not always required
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- Mar 02, 2011
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Daniel Sobral authored
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Daniel Sobral authored
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- Dec 01, 2010
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Steve Trevanion authored
changes to get it to do what I think it should do - 1) staging and staging2, 2) add an initial mapping_set entry if this is new species 3) warn if there is no mapping_set entry but this is not a new species - in this case I the genebuilders should be adding the old one since this is the scenario we want to catch! (need to check the assembly hasn't changed), 4) dry_run, ie preview mode
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- May 12, 2010
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Ian Longden authored
many changes but the most important is to only add seq_region mapping if the seq_region_ids are different
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- Apr 15, 2010
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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- Nov 19, 2009
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Ian Longden authored
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- Jul 10, 2008
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Daniel Rios authored
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