Remove setting of extra_data column in DNAAlignFeature table, so that new attrib adaptor is used exclusively. Port retiring extra_data eval code into AnalysisAdaptor, so that web_data can still be accessed, but eval is localised to a single class and not the entire set of adaptors.

Updated the new call to create the ProteinFeature object in ProteinFe…

Updated the new call to create the ProteinFeature object in ProteinFeatureAdaptor to match the attributes expected from ProteinFeature - ENSCORESW-1912: removed unused import

Updated the new call to create the ProteinFeature object in ProteinFeatureAdaptor to match the attributes expected from ProteinFeature - ENSCORESW-1912

Minor typo fix

Fix for minor copy and paste bug in documentation

Add fuzzy matching on synonyms

fetch_by_region allows fuzzy matching on the end of the given seq_region_name. Required for compara's HAL parsing.

Typo in Identity Xref function, variable should be $xref_end, not $xref_start

Master

If $load_transcripts is true, do not do lazy loading in any case (including when the number of genes is 1).

Fixed example to create and edit an AltAlleleGroup.

Updated fetch_all_by_Transcript method to optionally filter by featur…

If $load_exons is true, do not do lazy loading in any case (including when the number of transcripts is 1).

If $load_exons is true, do not do lazy loading in any case (including when the number of transcripts is 1).

Check that translations exist before comparing the sequences