Commits · c91cd6c98c2dea20f481e68bdf408c51363ec15a · ensembl-gh-mirror / ensembl

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Nov 22, 2012
- Can now compare transcripts and fixed some errors in the mapping code · c91cd6c9
  Andy Yates authored 12 years ago
  
  c91cd6c9
- Bad old method left in · 31e0fb39
  Andy Yates authored 12 years ago
  
  31e0fb39
- Unlinked type cleanup · 956a7c69
  Andy Yates authored 12 years ago
  
  956a7c69
- Updated the HTML code + display table colours in the tables list · 8406d0bf
  Laurent Gil authored 12 years ago
  
  8406d0bf
- Support locking of tables when doing this · 61cc9e2f
  Andy Yates authored 12 years ago
  
  61cc9e2f
- Adding seq_region_end to the sort · 97ab8bf6
  Andy Yates authored 12 years ago
  
  97ab8bf6
Nov 21, 2012
- Anything in default_options() is not taken over to the pipeline by default.... · ef0f669d
  Andy Yates authored 12 years ago
  ef0f669d
- Switching the logic around a little bit here to get rid of single | or... · 35bc4818
  Andy Yates authored 12 years ago
  35bc4818
- missed stderr · a7b53b89
  Andy Yates authored 12 years ago
  
  a7b53b89
- missed two prints · 649c8271
  Andy Yates authored 12 years ago
  
  649c8271
- missed a message and got the time the wrong way around · 74162582
  Andy Yates authored 12 years ago
  
  74162582
- import posix · 33242c35
  Andy Yates authored 12 years ago
  
  33242c35
- adding times · 9be725ac
  Andy Yates authored 12 years ago
  
  9be725ac
- Trying to sort feature tables · a604d5e1
  Andy Yates authored 12 years ago
  
  a604d5e1
- Fixing flush code · 77f083f3
  Andy Yates authored 12 years ago
  
  77f083f3
Nov 20, 2012
- Adding a "write_every" option as otherwise memory consumption is a bit large · 25988522
  Andy Yates authored 12 years ago
  
  25988522
- Fail if we have overlapping seq region ids · ad89744c
  Andy Yates authored 12 years ago
  
  ad89744c
- Warn after every 2000 parsed records · 55ad3802
  Andy Yates authored 12 years ago
  
  55ad3802
- Force quit · f3bab73d
  Andy Yates authored 12 years ago
  
  f3bab73d
- no password defaulting for dnadb. bad · 44021395
  Andy Yates authored 12 years ago
  
  44021395
- better password logic and using dbc() · 55988b5f
  Andy Yates authored 12 years ago
  
  55988b5f
- bad logic · 9a7ecff7
  Andy Yates authored 12 years ago
  
  9a7ecff7
- adding password only if needed · 15bc2107
  Andy Yates authored 12 years ago
  
  15bc2107
- default group is core · 3128ace2
  Andy Yates authored 12 years ago
  
  3128ace2
Nov 19, 2012
- Need to specify a dnadb · 0d7fc8eb
  Andy Yates authored 12 years ago
  
  0d7fc8eb
- Don't bother with URLs · ef486f9b
  Andy Yates authored 12 years ago
  
  ef486f9b
- NCBI CCDS mouse file was wrong · 8bfb3b27
  Andy Yates authored 12 years ago
  
  8bfb3b27
- Cannot see how this would not have worked without dereferencing the 0th element array · c5bd25fb
  Andy Yates authored 12 years ago
  
  c5bd25fb
Nov 18, 2012
- More options · 7fea0ca6
  Andy Yates authored 12 years ago
  
  7fea0ca6
Nov 17, 2012
- Import for BED file. · b4528f75
  Andy Yates authored 12 years ago
  
  b4528f75
Nov 16, 2012
- do not use the same variable name for two distinct things · 29361c46
  Magali Ruffier authored 12 years ago
  29361c46
- Caught a few more CCDS slips through the net · 21129c6d
  Andy Yates authored 12 years ago
  
  21129c6d
- added a dbtype option which allows to run on non-core databases · 4bc3174e
  Magali Ruffier authored 12 years ago
  4bc3174e
- used RGD as gene display xref · 7e4f0e02
  Magali Ruffier authored 12 years ago
  
  7e4f0e02
Nov 14, 2012
- add _is_patch method · 0d95be1c
  Steve Trevanion authored 12 years ago
  
  0d95be1c
- Script to examine exons before and after projection. Designed to work with... · 916be7be
  Kieron Taylor authored 12 years ago
  916be7be
- Make the efo search case-insensitive · 2a7421cf
  Andy Yates authored 12 years ago
  
  2a7421cf
- Reverting. Sharon & I were mistaken · e2a84aab
  Andy Yates authored 12 years ago
  
  e2a84aab
- Adding a repeat region SO term · 665b5df5
  Andy Yates authored 12 years ago
  
  665b5df5
Nov 13, 2012
- Bad SQL fixed after pointed out by Sharon Wei · f3ead7b8
  Andy Yates authored 12 years ago
  
  f3ead7b8