Changed local sources to have new LOCAL: convention so they can be dealt with more elegantly by BaseParser

ftp://ftp.ebi.ac.uk/pub/databases/SPproteomes/7227.spc

===========>

       ftp://ftp.ebi.ac.uk/pub/databases/integr8/17.D_melanogaster.dat.gz

and invertebrate9.protein.gpff.gz added

use FULL uniprot files and not species specific .SPC files. Okay this will be alot larger to down load and parse but will contain all the proteins and not just the non-redundant ones. For example. For rat we get 7 more swissprot and 2000 more trembl entrys with the large file.  I may need to add a new option on to the parser now to delete the files after loading for those with small disk space but this should be simple enough.

commented out locuslink and OMIM as these are not used now. Removed Wormbase and used wormpep_id instead as this will not confilct with the external_db defined values

Corrected species IDs for (currently commented out) UniGene entries

Unigene added but commented out for now as the next release does not want them but hopefully the one after will, so want to keep the data in the file