Commits · fc203ccc8f65fc2513c89d036757c263c8308717 · ensembl-gh-mirror / ensembl

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Jun 18, 2003
- removed after second thoughts · fc203ccc
  Eduardo Eyras authored 21 years ago
  
  fc203ccc
- module with some methods to convert gff into ensembl exons · a5c5d208
  Eduardo Eyras authored 21 years ago
  
  a5c5d208
Jun 14, 2003
- more checks · fdfd4dd6
  Emmanuel Mongin authored 21 years ago
  
  fdfd4dd6
Jun 13, 2003
- added organism specific checks · bab48e01
  Emmanuel Mongin authored 21 years ago
  
  bab48e01
- added GKB mapping · e259222a
  Emmanuel Mongin authored 21 years ago
  
  e259222a
- *** empty log message *** · 44c0c6d8
  Emmanuel Mongin authored 21 years ago
  
  44c0c6d8
- added some specific dros stuff1 · a1c490bd
  Emmanuel Mongin authored 21 years ago
  
  a1c490bd
Jun 12, 2003
- removed call to deprecated method · ba1cc76e
  Graham McVicker authored 21 years ago
  
  ba1cc76e
- dros options · 8c9c4078
  Emmanuel Mongin authored 21 years ago
  
  8c9c4078
Jun 11, 2003
- get_all_DBEntries should return [] instead of undef if there are no xrefs · 39664ac0
  Graham McVicker authored 21 years ago
  
  39664ac0
- less verbosity · 6a652e2d
  Graham McVicker authored 21 years ago
  
  6a652e2d
- small typo in sql query in store method · e1343737
  Stephen Keenan authored 21 years ago
  
  e1343737
- storing should now properly handle xrefs relating to Genes, Transcripts, Translations (untested) · 7e87c040
  Graham McVicker authored 21 years ago
  
  7e87c040
- added get_all_DBEntries methods, changed get_all_DBLinks implementation to reflect DBEntry changes · b6c11600
  Graham McVicker authored 21 years ago
  
  b6c11600
- fetch_all_by_Xxxxx methods made more sensible · 3838a456
  Graham McVicker authored 21 years ago
  
  3838a456
Jun 10, 2003
- added get_all_DBLinks method · e6167b5b
  Stephen Keenan authored 21 years ago
  
  e6167b5b
- added xref storing · f871f1bb
  Stephen Keenan authored 21 years ago
  
  f871f1bb
- Fix broken xref storing · 53713148
  Stephen Keenan authored 21 years ago
  
  53713148
- fix to broken fetch_all_by_Gene method · 479deb18
  Stephen Keenan authored 21 years ago
  
  479deb18
- new go_xref table definition · 20540306
  Arne Stabenau authored 21 years ago
  
  20540306
Jun 06, 2003
- · ae2f1f15
  Laura Clarke authored 21 years ago
```
extra option for elegans
```
  ae2f1f15
Jun 05, 2003
- removed from here, moved to ensembl/misc-scripts · 3c4fb39f
  Abel Ureta-Vidal authored 21 years ago
  
  3c4fb39f
- moved gene-descriptions.pl from ensembl/script to here and made it more generic · 18e38f73
  Abel Ureta-Vidal authored 21 years ago
  
  18e38f73
Jun 04, 2003
- *** empty log message *** · b419d27d
  Emmanuel Mongin authored 21 years ago
  
  b419d27d
- GoXref modifications · 3130038e
  Arne Stabenau authored 21 years ago
  
  3130038e
- test DBEntry and Adaptor · 61894965
  Arne Stabenau authored 21 years ago
  
  61894965
Jun 02, 2003
- added go_xref tables and test data · 9f02a3cb
  Arne Stabenau authored 21 years ago
  
  9f02a3cb
- GoXref have an added linkage_type for an Xref. Currently one of... · faa8632d
  Arne Stabenau authored 21 years ago
```
GoXref have an added linkage_type for an Xref. Currently one of "computational", "experimentl" or "curated"
```
  faa8632d
- first shot at GoXref with linkage_type information. · 45a2da23
  Arne Stabenau authored 21 years ago
  
  45a2da23
- new_fast sets synonym arrayref to [] · a70b95b1
  Graham McVicker authored 21 years ago
  
  a70b95b1
May 30, 2003
- added name index to chromosome · 8be1aa85
  Web Admin authored 21 years ago
  
  8be1aa85
- eval sql connection to see if table does exist - it doesnt have to · 1e9f75f9
  Web Admin authored 21 years ago
  
  1e9f75f9
May 29, 2003
- Getting the ArchiveStableId Adaptor · 072d45dc
  Arne Stabenau authored 21 years ago
  
  072d45dc
- bug fix · 3f294074
  Arne Stabenau authored 21 years ago
  
  3f294074
- fixed the method guess phases... still pretty dodgy · 99b2c5f0
  Emmanuel Mongin authored 21 years ago
  
  99b2c5f0
May 28, 2003
- bugfix · 10818107
  Arne Stabenau authored 21 years ago
  
  10818107
- stable_id_events, mapping_sessions, gene_archive, peptide_archive added · 0f3f92b6
  Arne Stabenau authored 21 years ago
  
  0f3f92b6
- Test file for archiveStableIds and adaptor · 29364805
  Arne Stabenau authored 21 years ago
  
  29364805
- Added some docs · d2a623a0
  Arne Stabenau authored 21 years ago
  
  d2a623a0
May 27, 2003
- Renamed a function · 1081d2cc
  Arne Stabenau authored 21 years ago
  
  1081d2cc