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Commit d4bb04fe authored by zmap's avatar zmap
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new zmap release notes for 20 January 2010

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<!-- File automatically generated. Do not edit. --!>
<!--#set var="banner" value="ZMap Release Notes For '20 January 2010'" -->
<!--#include virtual="/perl/header" -->
<!--#set var="author" value="edgrif@sanger.ac.uk" -->
<!-- The release version, etc... --!>
<h5>Release Version: ZMap 0.1.80 </h5>
<h5>Release Date: 20 January 2010</h5>
<p>
(Last release was on 15/01/2010)
</p>
<h5>Request Tracker Tickets Resolved</h5>
<br />
<!-- Now the resolved tickets... --!>
<!-- Finished getting the resolved request tracker tickets --!>
<fieldset><legend>zmap</legend>
<ul>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=152345">152345</a>, Resolved (Wed Jan 20 11:42:30 2010)
<p>doxygen docs not getting to dev. website.</p>
<p>mh17@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=153627">153627</a>, Resolved (Wed Jan 20 14:53:54 2010)
<p>zmap crash on 'configure colum'</p>
<p>mh17@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=153980">153980</a>, Resolved (Tue Jan 19 18:20:25 2010)
<p>test otterlace column hide not persistent between zooms</p>
<p>lw2@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=154773">154773</a>, Resolved (Tue Jan 19 14:19:35 2010)
<p>from time to time my curated objects got overlapped</p>
<p>ca1@sanger.ac.uk, vb1@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=155595">155595</a>, Resolved (Sun Jan 17 10:25:15 2010)
<p>Exon number display in top of Zmap - third panel</p>
<p>cas@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=155812">155812</a>, Resolved (Wed Jan 20 10:45:55 2010)
<p>testotterlace zmap crashes when exposing locator panel</p>
<p>lw2@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=155925">155925</a>, Resolved (Wed Jan 20 10:32:38 2010)
<p>unused column in feature show window</p>
<p>lw2@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=156034">156034</a>, Resolved (Tue Jan 19 17:18:37 2010)
<p>Empty preferences dialog when blixem executable not found</p>
<p>gb10@sanger.ac.uk</p>
</li>
<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=156117">156117</a>, Resolved (Wed Jan 20 10:55:49 2010)
<p>crashed on bumping ens_cdna</p>
<p>gdr@sanger.ac.uk</p>
</li>
</ul>
</fieldset><br />
<!-- End of tickets --!>
<fieldset>
<legend>ZMap Changes/Fixes [from cvs]</legend>
<ul>
<li><!-- --- Start editing ZMap changes here... --- --!>
<a href="http://cvs.internal.sanger.ac.uk/cgi-bin/viewcvs.cgi/ZMap/?root=zmap">Browse CVS</a>
</li>
<li> doc/Release_notes/release_notes.2010_01_15.shtml: new zmap
release notes for 15 January 2010
</li>
<li> src/include/ZMap/zmapWebPages.h: update release notes file to
release_notes.2010_01_15.shtml
</li>
<li> doc/Release_notes/LAST_RELEASE_DATE.txt: update last release
notes to 15/01/2010
</li>
<li> src/zmapUtils/zmapUtils_P.h:
/var/tmp/zmap.12481/ZMap/scripts/versioner run by zmap
</li>
<li> src/zmapWindow/zmapWindowColBump.c: reverted yesterdays non-fix
</li>
<li> doc/Grant/GRANT_APP.txt: sticking this here for now...
</li>
<li> src/zmapWindow/zmapWindowItemFactory.c: fix bug in exon number
reporting when revcompd.
</li>
<li> src/include/ZMap/zmapXRemote.h: hack version to match lace
version...temporary....
</li>
<li> src/zmapControl/remote/zmapXRemote.c: hack version to match lace
version...temporary....
</li>
<li> src/zmapView/zmapViewRemoteReceive.c: remove checking for
existing feature as temp fix...
</li>
<li> src/zmapWindow/: zmapWindow.c, zmapWindowDraw.c,
items/zmapWindowContainerFeatureSet.c,
items/zmapWindowContainerGroup.c,
items/zmapWindowContainerGroup.h: Fix setting of values in
multiple styles so that zooming and hidden columns work again.
</li>
<li> src/zmapView/zmapViewCallBlixem.c: fix my own stupid file
permissions bug.
</li>
<li> src/: zmapFeature/zmapFeature.c,
zmapWindow/items/zmapWindowContainerFeatureSet.c,
zmapWindow/items/zmapWindowContainerFeatureSet.h,
zmapWindow/items/zmapWindowContainerUtils.c,
zmapWindow/zmapWindowItem.c: unsorted featuresets on new feature
added to try to fix overlap bug - displayed format is now stable
from first display. Difficult to test as cannot create overlap on
demand
</li>
<li> src/zmapWindow/zmapWindowDrawFeatures.c: fixed indirection error
in in windowDrawContextCB
</li>
<li> src/: zmapControl/zmapControlPreferences.c,
zmapUtils/zmapGUINotebook.c, zmapView/zmapViewCallBlixem.c: fixed
prefernces dialog for blixem path, now runs even if not
congigured
</li>
<li> src/zmapWindow/zmapWindowDraw.c: use new call to set display in
feature set container.
</li>
<li> src/zmapWindow/items/: zmapWindowContainerFeatureSet.c,
zmapWindowContainerFeatureSet.h: add new version of display mode
setting code to fix bugs.
</li>
<li> src/zmapWindow/zmapWindowColConfig.c: fix up a few bugs in
interactions between col dialog and menu hide.
</li>
<li> src/zmapWindow/items/zmapWindowContainerFeatureSet.c: Silly
uninitialized variable bug. Better now
</li>
<li> src/zmapWindow/: zmapWindowColBump.c, zmapWindowMenus.c,
zmapWindow_P.h: made unbump all columns work as exepcted
<!-- --- End editing ZMap changes here... --- --!>
</li>
</ul>
</fieldset>
<br />
<fieldset>
<legend>Aceb Changes/Fixes [from cvs]</legend>
<ul>
<li><!-- --- Start editing ACeDB changes here... --- --!>
<a href="http://cvs.internal.sanger.ac.uk/cgi-bin/viewcvs.cgi/acedb/?root=acedb">Browse CVS</a>
</li>
<li> w9/blxFetch.c: Fixed a memory bug that was causing readConfigFile
to fail on 64 bit machines
</li>
<li> w9/blxview.c: Added extra debug for the error in calcID where
requested coords are out of range
</li>
<li> w7/smapconvert.c: add debug stuff to converthomol().
</li>
<li> w6/smap.c: fix stupid bug in sMapComposeMaps...got strand wrong
for 1 base pair align blocks.
<!-- --- End editing ACeDB changes here... --- --!>
</li>
</ul>
</fieldset>
<br />
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