Explore projects

Compute the distribution of reads on genomic locations; compute the coverage of repeat elements for each cell barcode; extract the reads spanning splicing junctions

split paired FASTQ files into chunks of nseq sequences

resops play

A small demonstration for the purpose of our ResOps tutorial

ci/cd and k8s example

Extract groups of sequences sharing the same barcode using a graph approach

https://tsi-ccdoc.readthedocs.io/en/latest/ResOps/2019/gitlab/02_create-sample-project.html

Deployment scripts to run the Bioexcel Binder service.