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BioBert model trained on EPMC dataset for NER task
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This repo contains the code to analyse the data for assemblies manuscript
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Literature-services / machine-learning / EMERALD_METAGENOMICS_ANNOTATIONS
Apache License 2.0Updated -
Extract Proteins, Genes, and Diseases from text
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Microbiome Informatics / holofood-database
Apache License 2.0HoloFood is a project investigating sustainable food production through hologenomics. This Django app is the data portal where samples and other datasets from the project are made publicly available.
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Named Entity Recognition for Disorder, Species, Chemical or Drug, Gene and Protein, Enzyme, Anatomy, Biological Process, Molecular Function, Cellular Component, Pathway and microRNAs.
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Soham Mandal / SplineDist
BSD 3-Clause "New" or "Revised" LicenseArchived 0Updated -
Literature-services / public-projects / EMERALD_METAGENOMICS_ANNOTATIONS
Apache License 2.0Updated -
Development for python driven QC calculation (QCCalculator) and presentation (QSpector)
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Abhik Mukhopadhyay / ccdutils
Apache License 2.0Small molecules chemistry toolkit. Documentation is available at Gitlab pages: https://pdbe.gitdocs.ebi.ac.uk/ccdutils/
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This repo contains the code to analyse the data for assemblies manuscript
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TSI / kubeflow
Apache License 2.0Archived 0Updated -
Literature-services / machine-learning / CAPITAL
MIT LicenseContenxtual Annotations Pipeline with Tagging and Linking (CAPITAL)
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Predoc course, QBM module, image analysis challenge
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