CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.
In this repository, I am going to share all the data and codes required to reproduce my library gene selection steps for the 2D CRISPR Project (Colorectal and Breast cancer cell lines)
Dockerfile for e-Learning Transcriptomics CABANA 2018
IMPC statistical pipeline docker image
This package complements the performance evaluation for the manuscript entitled "Use of viral motif mimicry improves the proteome-wide discovery of human linear motifs"
Automated container for Analysis of High Throughput Sequencing Data
DIA-reanalysis pipeline code and results
Miscellaneous R scripts to do: clone analysis via GBC, gene expression analysis on Seurat, cell-cell interactions analysis with CellPhoneDb, gene network inference with SCENIC, demultiplexing with MULTI-Seq barcodes
Extract groups of sequences sharing the same barcode using a graph approach
Docker files for Metagenomics Bioinformatics MGnify session.